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IVF0026074 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026074
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:15607270..15607473
RNA-Seq ExpressionIVF0026074
SyntenyIVF0026074
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035628.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.23e-2163.64Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPN
        +T CLLH+LIN EMTN DI D+ D+ DST+ TT+ D+I+YIE SN+W+QWRD LAE MF+EW+L N
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPN

KAA0051984.1 retrotransposon protein [Cucumis melo var. makuwa]3.86e-2479.66Show/hide
Query:  YCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNE
        Y LLH+LIN EMTNADILDD+DKGDST+TTTS +NI YIE SN+WTQWRDALAE M NE
Subjt:  YCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNE

KAA0063753.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.78e-2264.06Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL
        M  CLLH+LIN EMTN++I+DD D+ DSTY TT  D INYIEASN+W++WRD LA  MF++W+L
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL

TYK10940.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.05e-2164.06Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL
        M  CLLH+LIN EMTN++I D+ D+ DSTYTTT  D INYIEASN+W++WRD LA  MF++W+L
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL

XP_031742024.1 uncharacterized protein LOC105435527 [Cucumis sativus]3.78e-2469.12Show/hide
Query:  MTYCLLHDLINLEMTNADILDD-KDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPND
        M  CLLH+LIN EMTN D LD+ +D+GDS Y TT  D+INYIEASN+WTQWRD LA+ MFNEWQ  ND
Subjt:  MTYCLLHDLINLEMTNADILDD-KDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPND

TrEMBL top hitse value%identityAlignment
A0A5A7V6M3 Putative nuclease HARBI13.4e-1664.06Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL
        M  CLLH+LIN EMTN++I+DD D+ DSTY TT  D INYIEASN+W++WRD LA  MF++W+L
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL

A0A5D3BQ11 Putative nuclease HARBI11.3e-1563.64Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPN
        +T CLLH+LIN EMTN DILDD D+ DST+ TT+ D+I+YIE  N+WTQWRD LA+ MF++W+L N
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPN

A0A5D3BZZ3 Retrotransposon protein8.1e-1879.66Show/hide
Query:  YCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNE
        Y LLH+LIN EMTNADILDD+DKGDST+TTTS +NI YIE SN+WTQWRDALAE M NE
Subjt:  YCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNE

A0A5D3CHV9 Putative nuclease HARBI19.8e-1664.06Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL
        M  CLLH+LIN EMTN++I D+ D+ DSTYTTT  D INYIEASN+W++WRD LA  MF++W+L
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL

A0A5D3DG22 Retrotransposon protein6.8e-1765.62Show/hide
Query:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL
        M  CLLH+LIN EMTN++I+DD D+GDSTY TT  D INYIEASN+W++WRD LA  MF++W+L
Subjt:  MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTATTGTCTACTCCATGATTTAATAAATCTTGAGATGACGAATGCTGACATATTGGACGACAAAGATAAGGGTGACTCGACATACACAACTACTAGCGATGACAA
CATCAACTACATTGAGGCCTCAAACAAATGGACTCAATGGAGAGATGCCCTTGCGGAATTGATGTTCAACGAATGGCAGTTGCCTAATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTATTGTCTACTCCATGATTTAATAAATCTTGAGATGACGAATGCTGACATATTGGACGACAAAGATAAGGGTGACTCGACATACACAACTACTAGCGATGACAA
CATCAACTACATTGAGGCCTCAAACAAATGGACTCAATGGAGAGATGCCCTTGCGGAATTGATGTTCAACGAATGGCAGTTGCCTAATGATTAG
Protein sequenceShow/hide protein sequence
MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPND