; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026095 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026095
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:5940757..5942332
RNA-Seq ExpressionIVF0026095
SyntenyIVF0026095
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037703.1 uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]6.68e-16658.85Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL TT R KSVAGISSQVEVDLNQVLEDMPAYP GFT QRSSSPRMTYPTQNP  ITQQ +HVSDPM TP T+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SGKKISEEQGSRKRLEFLEERLRAIEE-----NISTTMIW---------------------------HPIV-----------------------------
        SGKKISEEQ SRKRLEFLEERLR IE      +I  T +                            H ++                             
Subjt:  SGKKISEEQGSRKRLEFLEERLRAIEE-----NISTTMIW---------------------------HPIV-----------------------------

Query:  WIFR-------EWK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT
        W  +        WK                           KKNVETFKEYAQRWRELA QVQPPLT KELMAMFINTLRAPYYDRMVGSASTNFSDVIT
Subjt:  WIFR-------EWK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT

Query:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------
        IGE IEFG                            LSST++VVHVSS TVGQ NYSY+YQNG                                     
Subjt:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------

Query:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA
           VGH TEN FPLKAKVQSLVKAGWLKFKKTEEE DVNQNPLPNHEGPAINIVD FT+RYKNKVCDVTTS+NTLFQIL RAGYLSPRFNNDEG KFGCA
Subjt:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA

Query:  NEK
        NEK
Subjt:  NEK

KAA0038979.1 uncharacterized protein E6C27_scaffold84G00600 [Cucumis melo var. makuwa]1.10e-16864.98Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELL T RGKSV  ISS+VEVDLN VLEDMPAYPPGFT QRSSSPRMTYPTQNP  ITQQENHVSDPM TP T+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SG------------KKISEEQGSRKRLEFLEERLRAI--EENISTTMIWHPIVWIFREW------------KKKNVETFKEYAQRWRELAAQVQPPLTFK
        S             +K +     +  L     ++ A   ++ +        +V     W            +KKNVETFKEYAQRWRELAAQVQPPLT K
Subjt:  SG------------KKISEEQGSRKRLEFLEERLRAI--EENISTTMIWHPIVWIFREW------------KKKNVETFKEYAQRWRELAAQVQPPLTFK

Query:  ELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG------
        ELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG                            LSSTQRVVHVSS TVGQTNYSYSYQN       
Subjt:  ELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG------

Query:  ----------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVT
                                          VGH TEN FPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVT
Subjt:  ----------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVT

Query:  TSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK
        TS+NTLFQILRRAGYLSPRFNNDEGEKFGCANEK
Subjt:  TSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK

KAA0055146.1 uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]2.59e-16557.52Show/hide
Query:  VQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTESGKKISEE
        VQAVRQDVEGLKDQLAKILELLTT RGKSV GISSQVEVDLNQVLEDMPAYP GFT QRSSSP MTYPTQNP  ITQQENHVSDPM TP TESGKKISEE
Subjt:  VQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTESGKKISEE

Query:  QGSRKRLEFLEERLRAI-------------------------------EENISTTMIWHPIVWIFRE---------------------------------
        QGSRKRLEFLEERLRAI                               E+   TT     +V   R+                                 
Subjt:  QGSRKRLEFLEERLRAI-------------------------------EENISTTMIWHPIVWIFRE---------------------------------

Query:  ----WK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG
            WK                           KKNVETFKEYAQRWRELAAQVQPPLT KELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG
Subjt:  ----WK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG

Query:  ----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG---------------------------------------------
                                    LSSTQRVVHVSS  VGQTNYSYSYQNG                                             
Subjt:  ----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG---------------------------------------------

Query:  -------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQI
                                 VGH TEN FPLKAKVQSLVKAGWLKFKK EEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTS+NTLFQI
Subjt:  -------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQI

Query:  LRRAGYLSPRFNNDEGEKFGCANEK
        LRRAGYLSPRFNNDEGEKFGCANEK
Subjt:  LRRAGYLSPRFNNDEGEKFGCANEK

KAA0060308.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.25e-14057.27Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTT RGKSV GISSQVEVDLNQVLEDMPAYP GFT QRSSSP MTY TQNP  ITQQENH+SDPM T  TE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SGKKISEEQGSRKRLEFLEERLRAIE------ENISTTMIWHPIVWIFREWKKKNVETFKE-----------------YAQRWRELAAQVQPPLTFKELM
        SGKKISEEQGSRK+LEFLEERLRAIE         +T +     V I  ++K  + E + E                 YA   + L    Q  L    L 
Subjt:  SGKKISEEQGSRKRLEFLEERLRAIE------ENISTTMIWHPIVWIFREWKKKNVETFKE-----------------YAQRWRELAAQVQPPLTFKELM

Query:  AMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG---------
          +   L      RMVGSASTNFSDVITIGERIEFG                            LSSTQRVVHVSS TVGQTNYSYSYQNG         
Subjt:  AMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG---------

Query:  -------------------------------------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNP
                                                                     VGH TEN FPLK KVQSLVKA WLKFKKTEEESDVNQNP
Subjt:  -------------------------------------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNP

Query:  LPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK
         PNHE P INI DTFTERYKNKVCDVTTS+NTLFQILRRAGYLSPRFNNDEGEKF CANE+
Subjt:  LPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK

XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]7.46e-16758.85Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL TT R KSVAGISSQVEVDLNQVLEDMPAYP GFT QRSSSPRMTYPTQNP  ITQQ +HVSDPM TP T+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SGKKISEEQGSRKRLEFLEERLRAIEE-----NISTTMIW---------------------------HPIV-----------------------------
        SGKKISEEQ SRKRLEFLEERLR IE      +I  T +                            H ++                             
Subjt:  SGKKISEEQGSRKRLEFLEERLRAIEE-----NISTTMIW---------------------------HPIV-----------------------------

Query:  WIFR-------EWK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT
        W  +        WK                           KKNVETFKEYAQRWRELA QVQPPLT KELMAMFINTLRAPYYDRMVGSASTNFSDVIT
Subjt:  WIFR-------EWK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT

Query:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------
        IGE IEFG                            LSST++VVHVSS TVGQ NYSY+YQNG                                     
Subjt:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------

Query:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA
           VGH TEN FPLKAKVQSLVKAGWLKFKKTEEE DVNQNPLPNHEGPAINIVD FT+RYKNKVCDVTTS+NTLFQIL RAGYLSPRFNNDEG KFGCA
Subjt:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA

Query:  NEK
        NEK
Subjt:  NEK

TrEMBL top hitse value%identityAlignment
A0A1S4E534 uncharacterized protein LOC1035028385.3e-13458.45Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL TT R KSVAGISSQVEVDLNQVLEDMPAYP GFT QRSSSPRMTYPTQNP  ITQQ +HVSDPM TP T+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SGKKISEEQGSRKRLEFLEERLRAIE-----ENISTTMI-------------------------------------------------------------
        SGKKISEEQ SRKRLEFLEERLR IE      +I  T +                                                             
Subjt:  SGKKISEEQGSRKRLEFLEERLRAIE-----ENISTTMI-------------------------------------------------------------

Query:  ------------WHPIVWIF-----------------REWKKKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT
                    W  +   F                 +  +KKNVETFKEYAQRWRELA QVQPPLT KELMAMFINTLRAPYYDRMVGSASTNFSDVIT
Subjt:  ------------WHPIVWIF-----------------REWKKKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT

Query:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------
        IGE IEFG                            LSST++VVHVSS TVGQ NYSY+YQNG                                     
Subjt:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------

Query:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA
           VGH TEN FPLKAKVQSLVKAGWLKFKKTEEE DVNQNPLPNHEGPAINIVD FT+RYKNKVCDVTTS+NTLFQIL RAGYLSPRFNNDEG KFGCA
Subjt:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA

Query:  NEK
        NEK
Subjt:  NEK

A0A5A7T401 Retrotrans_gag domain-containing protein5.3e-13458.45Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILEL TT R KSVAGISSQVEVDLNQVLEDMPAYP GFT QRSSSPRMTYPTQNP  ITQQ +HVSDPM TP T+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SGKKISEEQGSRKRLEFLEERLRAIE-----ENISTTMI-------------------------------------------------------------
        SGKKISEEQ SRKRLEFLEERLR IE      +I  T +                                                             
Subjt:  SGKKISEEQGSRKRLEFLEERLRAIE-----ENISTTMI-------------------------------------------------------------

Query:  ------------WHPIVWIF-----------------REWKKKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT
                    W  +   F                 +  +KKNVETFKEYAQRWRELA QVQPPLT KELMAMFINTLRAPYYDRMVGSASTNFSDVIT
Subjt:  ------------WHPIVWIF-----------------REWKKKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVIT

Query:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------
        IGE IEFG                            LSST++VVHVSS TVGQ NYSY+YQNG                                     
Subjt:  IGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG-------------------------------------

Query:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA
           VGH TEN FPLKAKVQSLVKAGWLKFKKTEEE DVNQNPLPNHEGPAINIVD FT+RYKNKVCDVTTS+NTLFQIL RAGYLSPRFNNDEG KFGCA
Subjt:  ---VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCA

Query:  NEK
        NEK
Subjt:  NEK

A0A5A7TCG9 Uncharacterized protein1.6e-13364.75Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELL T RGKSV  ISS+VEVDLN VLEDMPAYPPGFT QRSSSPRMTYPTQNP  ITQQENHVSDPM TP T+
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SG------------KKISEEQGSRKRLEFLEERLRAIEEN-------ISTTMIWHPIVWIFR-------EWKKKNVETFKEYAQRWRELAAQVQPPLTFK
        S             +K +     +  L     ++ A   +          +++     W  +         +KKNVETFKEYAQRWRELAAQVQPPLT K
Subjt:  SG------------KKISEEQGSRKRLEFLEERLRAIEEN-------ISTTMIWHPIVWIFR-------EWKKKNVETFKEYAQRWRELAAQVQPPLTFK

Query:  ELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG------
        ELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG                            LSSTQRVVHVSS TVGQTNYSYSYQN       
Subjt:  ELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG------

Query:  ----------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVT
                                          VGH TEN FPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVT
Subjt:  ----------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVT

Query:  TSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK
        TS+NTLFQILRRAGYLSPRFNNDEGEKFGCANEK
Subjt:  TSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK

A0A5A7ULI2 Retrotrans_gag domain-containing protein7.0e-13457.41Show/hide
Query:  QVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTESGKKISE
        +VQAVRQDVEGLKDQLAKILELLTT RGKSV GISSQVEVDLNQVLEDMPAYP GFT QRSSSP MTYPTQNP  ITQQENHVSDPM TP TESGKKISE
Subjt:  QVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTESGKKISE

Query:  EQGSRKRLEFLEERLRAI-------------------------------EENISTTMIWHPIVWIFRE--------------------------------
        EQGSRKRLEFLEERLRAI                               E+   TT     +V   R+                                
Subjt:  EQGSRKRLEFLEERLRAI-------------------------------EENISTTMIWHPIVWIFRE--------------------------------

Query:  -----WK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEF
             WK                           KKNVETFKEYAQRWRELAAQVQPPLT KELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEF
Subjt:  -----WK---------------------------KKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEF

Query:  G----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG--------------------------------------------
        G                            LSSTQRVVHVSS  VGQTNYSYSYQNG                                            
Subjt:  G----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG--------------------------------------------

Query:  --------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQ
                                  VGH TEN FPLKAKVQSLVKAGWLKFKK EEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTS+NTLFQ
Subjt:  --------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQ

Query:  ILRRAGYLSPRFNNDEGEKFGCANEK
        ILRRAGYLSPRFNNDEGEKFGCANEK
Subjt:  ILRRAGYLSPRFNNDEGEKFGCANEK

A0A5D3DEF4 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein4.0e-11357.27Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTT RGKSV GISSQVEVDLNQVLEDMPAYP GFT QRSSSP MTY TQNP  ITQQENH+SDPM T  TE
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTE

Query:  SGKKISEEQGSRKRLEFLEERLRAIE------ENISTTMIWHPIVWIFREWKKKNVETFKE-----------------YAQRWRELAAQVQPPLTFKELM
        SGKKISEEQGSRK+LEFLEERLRAIE         +T +     V I  ++K  + E + E                 YA   + L    Q  L    L 
Subjt:  SGKKISEEQGSRKRLEFLEERLRAIE------ENISTTMIWHPIVWIFREWKKKNVETFKE-----------------YAQRWRELAAQVQPPLTFKELM

Query:  AMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG---------
          +   L      RMVGSASTNFSDVITIGERIEFG                            LSSTQRVVHVSS TVGQTNYSYSYQNG         
Subjt:  AMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFG----------------------------LSSTQRVVHVSSSTVGQTNYSYSYQNG---------

Query:  -------------------------------------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNP
                                                                     VGH TEN FPLK KVQSLVKA WLKFKKTEEESDVNQNP
Subjt:  -------------------------------------------------------------VGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNP

Query:  LPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK
         PNHE P INI DTFTERYKNKVCDVTTS+NTLFQILRRAGYLSPRFNNDEGEKF CANE+
Subjt:  LPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDEGEKFGCANEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTCACTACTAGAAGAGGAAAGAG
TGTTGCGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTTCGCAAAGGTCGTCTAGTCCTCGCATGA
CTTATCCTACACAAAATCCTACTTCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTGTACTCCAAGTACAGAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGT
AGTAGAAAAAGACTGGAATTTCTAGAAGAAAGATTACGCGCCATTGAAGAAAATATAAGTACAACAATGATATGGCACCCGATCGTCTGGATCTTCAGAGAATGGAAAAA
AAAGAATGTTGAAACTTTCAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACATTCAAAGAATTGATGGCTATGTTCATAAACACTC
TTCGGGCCCCATATTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCAGACGTCATAACCATTGGGGAGAGGATTGAATTTGGATTGAGCTCGACTCAAAGAGTA
GTGCATGTATCCTCATCAACTGTGGGGCAGACAAATTACTCCTATAGTTATCAGAATGGAGTTGGACATTATACTGAGAACAGTTTTCCTTTGAAAGCTAAAGTGCAAAG
TCTAGTCAAGGCCGGATGGTTGAAATTCAAGAAGACAGAAGAAGAGTCTGACGTTAACCAGAACCCTTTACCAAATCATGAGGGTCCCGCCATAAATATTGTTGACACAT
TCACGGAAAGATACAAGAATAAGGTGTGTGATGTGACTACTTCAATAAATACACTTTTCCAAATCCTTCGTAGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGAG
GGGGAGAAGTTTGGATGCGCCAACGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTAGAACTGCTCACTACTAGAAGAGGAAAGAG
TGTTGCGGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTTCGCAAAGGTCGTCTAGTCCTCGCATGA
CTTATCCTACACAAAATCCTACTTCGATCACCCAACAGGAAAACCATGTGAGCGATCCAATGTGTACTCCAAGTACAGAAAGTGGTAAGAAAATTTCAGAAGAGCAGGGT
AGTAGAAAAAGACTGGAATTTCTAGAAGAAAGATTACGCGCCATTGAAGAAAATATAAGTACAACAATGATATGGCACCCGATCGTCTGGATCTTCAGAGAATGGAAAAA
AAAGAATGTTGAAACTTTCAAGGAATATGCACAGCGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCTGACATTCAAAGAATTGATGGCTATGTTCATAAACACTC
TTCGGGCCCCATATTATGATAGAATGGTTGGAAGTGCTTCAACTAATTTCTCAGACGTCATAACCATTGGGGAGAGGATTGAATTTGGATTGAGCTCGACTCAAAGAGTA
GTGCATGTATCCTCATCAACTGTGGGGCAGACAAATTACTCCTATAGTTATCAGAATGGAGTTGGACATTATACTGAGAACAGTTTTCCTTTGAAAGCTAAAGTGCAAAG
TCTAGTCAAGGCCGGATGGTTGAAATTCAAGAAGACAGAAGAAGAGTCTGACGTTAACCAGAACCCTTTACCAAATCATGAGGGTCCCGCCATAAATATTGTTGACACAT
TCACGGAAAGATACAAGAATAAGGTGTGTGATGTGACTACTTCAATAAATACACTTTTCCAAATCCTTCGTAGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGAG
GGGGAGAAGTTTGGATGCGCCAACGAGAAGTAG
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTRRGKSVAGISSQVEVDLNQVLEDMPAYPPGFTSQRSSSPRMTYPTQNPTSITQQENHVSDPMCTPSTESGKKISEEQG
SRKRLEFLEERLRAIEENISTTMIWHPIVWIFREWKKKNVETFKEYAQRWRELAAQVQPPLTFKELMAMFINTLRAPYYDRMVGSASTNFSDVITIGERIEFGLSSTQRV
VHVSSSTVGQTNYSYSYQNGVGHYTENSFPLKAKVQSLVKAGWLKFKKTEEESDVNQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSINTLFQILRRAGYLSPRFNNDE
GEKFGCANEK