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IVF0026104 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026104
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription initiation factor TFIID subunit 11 isoform X3
Genome locationchr09:15517916..15518731
RNA-Seq ExpressionIVF0026104
SyntenyIVF0026104
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066134.1 transcription initiation factor TFIID subunit 11 isoform X3 [Cucumis melo var. makuwa]1.69e-123100Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

KAG7016610.1 hypothetical protein SDJN02_21720, partial [Cucurbita argyrosperma subsp. argyrosperma]8.70e-9383.25Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MD RK  G GN+DEQ  +EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSS+AAA  RNPR S PH QSDSSSRPPP IENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEE------EEFISSDEDVNDRIKERRKKKA
        SQSIL DDLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDAARLDPSPPSEEDDE+      EEF SSDED++DR KERRKKKA
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEE------EEFISSDEDVNDRIKERRKKKA

TYK15177.1 transcription initiation factor TFIID subunit 11 isoform X3 [Cucumis melo var. makuwa]1.98e-12299.48Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

XP_004150191.1 uncharacterized protein LOC101219995 [Cucumis sativus]3.02e-10187.5Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKL+LDSHMSRVSPNYL SDLDRRFQALRSRP          PRSSHPHIQSDSS +PPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSS  P SSSIPND DS DEEDEVEKLIQWAKDAARLDPSPPSEE DEEEEF SSDEDV+DRIKERRKKK G
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

XP_016903615.1 PREDICTED: uncharacterized protein LOC103502866 [Cucumis melo]2.31e-12198.44Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDL+LKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDR+KERRKKKAG
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

TrEMBL top hitse value%identityAlignment
A0A1S4E6L5 uncharacterized protein LOC1035028661.5e-9398.44Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDL+LKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDR+KERRKKKAG
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

A0A5A7VFP6 Transcription initiation factor TFIID subunit 11 isoform X33.6e-95100Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

A0A5D3CTC3 Transcription initiation factor TFIID subunit 11 isoform X32.3e-9499.48Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

A0A6J1FGM0 nucleolin5.2e-7084.02Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MD RK    GN+D  EQ+EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSS AAA  RNPR S PH QSDSSSR PPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE---EEEFISSDEDVNDRIKERRKKKA
        SQSIL DDLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDAARLDPSPPSEEDDE   +EEF SSDED++DR KERRKKKA
Subjt:  SQSILDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE---EEEFISSDEDVNDRIKERRKKKA

A0A6J1JTW4 glucosidase 2 subunit beta8.9e-7082.38Show/hide
Query:  KKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSI
        +K G GN+D  EQ+EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSS AA   RNPR+S PH QSDSSSR PPPIENLVVDGESQSI
Subjt:  KKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSI

Query:  LDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE------EEEFISSDEDVNDRIKERRKKKA
        L DDLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDA RLDPSPPSEEDDE      +EEF SSDED++DR KERRKKKA
Subjt:  LDDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE------EEEFISSDEDVNDRIKERRKKKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24370.1 unknown protein5.8e-2141.99Show/hide
Query:  RGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSILDDD
        R    E++++EQLLQAAQD+++LKL++DSH SR S +YL  DL  RF AL+S+            +      Q     R  P  +++V +        +D
Subjt:  RGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSILDDD

Query:  LAARFAALKASLPSSTTPPS----SSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKE
        L  RFAALK SLPS+++  S      I  D D   E+ EV+KLIQWA DAARLDPSP S  DDE+ +   SD D ND  ++
Subjt:  LAARFAALKASLPSSTTPPS----SSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGAGAAAGAAGACGGGAAGAGGCAACGACGACGAACAGGAACAAATCGAGCAATTGTTACAAGCAGCTCAAGACGATCTTATGCTCAAATTGACCCTCGATTC
TCACATGTCTCGTGTTTCCCCAAACTATCTCCATTCCGATCTCGATCGCCGTTTCCAAGCCCTAAGATCGCGTCCTTCCTCCACCGCCGCCGCCGTTCCCCGCAATCCTC
GCTCTTCTCACCCGCATATTCAGTCCGATTCCTCGTCCCGACCCCCGCCGCCGATTGAAAATCTCGTCGTCGATGGCGAATCTCAGTCGATTCTCGACGACGATCTTGCT
GCTAGATTCGCTGCTCTGAAGGCGTCTTTGCCTTCCTCGACTACTCCGCCTTCATCCTCGATACCTAATGATGTTGATAGCGCGGACGAAGAGGATGAGGTTGAGAAGCT
GATTCAGTGGGCCAAGGATGCCGCTCGACTCGATCCTTCGCCTCCATCTGAGGAAGACGATGAAGAAGAGGAGTTCATCAGTTCCGATGAAGATGTCAACGATCGGATAA
AAGAGCGTCGGAAAAAGAAGGCCGGATGA
mRNA sequenceShow/hide mRNA sequence
CTAGTAGAAAAAAAAAGGTATTTTTTACAAAATTCCTAAAAAGATCCACAAAACAAGAGAAGAATGGATTCGAGAAAGAAGACGGGAAGAGGCAACGACGACGAACAGGA
ACAAATCGAGCAATTGTTACAAGCAGCTCAAGACGATCTTATGCTCAAATTGACCCTCGATTCTCACATGTCTCGTGTTTCCCCAAACTATCTCCATTCCGATCTCGATC
GCCGTTTCCAAGCCCTAAGATCGCGTCCTTCCTCCACCGCCGCCGCCGTTCCCCGCAATCCTCGCTCTTCTCACCCGCATATTCAGTCCGATTCCTCGTCCCGACCCCCG
CCGCCGATTGAAAATCTCGTCGTCGATGGCGAATCTCAGTCGATTCTCGACGACGATCTTGCTGCTAGATTCGCTGCTCTGAAGGCGTCTTTGCCTTCCTCGACTACTCC
GCCTTCATCCTCGATACCTAATGATGTTGATAGCGCGGACGAAGAGGATGAGGTTGAGAAGCTGATTCAGTGGGCCAAGGATGCCGCTCGACTCGATCCTTCGCCTCCAT
CTGAGGAAGACGATGAAGAAGAGGAGTTCATCAGTTCCGATGAAGATGTCAACGATCGGATAAAAGAGCGTCGGAAAAAGAAGGCCGGATGAGCGTCGATTGAAACTGCT
GTCTGTTCGTGCAGCATTATTCGATTCACTGATTTGTGGCATTTTAGAAACTGGAGATTCGCACATTGGATAGATACAATCCGGATTTTGGTTGAACTAGATCGTGATAA
CGGAAGCCTCTCCGGCGCGGCGTCTCAAATTACAAGTTGAAGTACG
Protein sequenceShow/hide protein sequence
MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSILDDDLA
ARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG