CuGenDBv2

Gene ID	IVF0026105
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ferredoxin-thioredoxin reductase, variable chain
Genome location	chr10:4611730..4612748
RNA-Seq Expression	IVF0026105
Synteny	IVF0026105
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0016310 - phosphorylation (biological process) GO:0030148 - sphingolipid biosynthetic process (biological process) GO:0003951 - NAD+ kinase activity (molecular function) GO:0017050 - D-erythro-sphingosine kinase activity (molecular function)
InterPro domains	IPR004207 - Ferredoxin thioredoxin reductase, alpha chain IPR008990 - Electron transport accessory-like domain superfamily IPR044166 - Ferredoxin-thioredoxin reductase, variable chain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034101.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa]

1.24e-106

100

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

XP_004147092.1 ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus]

1.29e-108

92.82

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSIRRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

XP_008445916.1 PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]

4.38e-116

100

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

XP_023549490.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.44e-95

85.08

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCSIRRGRR FSEV+V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

XP_038893043.1 ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]

5.04e-106

91.71

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS AAR ACSMTVFS +DV+SS+SSSVCSLSSVVVNPFNCSIRRGRRLFSEV VRSDSGTS SATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY+
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV36 FeThRed_A domain-containing protein

6.6e-83

92.82

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI IANSIG++P P PSSAS+AARFACSMTVFST+DV+SSFSSSVCSLSS+VVNPFNCSIRRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+ANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain

1.4e-88

100

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

A0A5D3D039 Sphingoid long-chain bases kinase 1

1.4e-88

100

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

A0A6J1H0Z6 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

4.0e-72

84.53

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCSI RGRR FSEV+V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

A0A6J1KDF2 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

2.0e-71

83.98

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Query:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+SSSV SLSSVVVNPFNCSI RGRR FSEV+V+SDSGT SSA AVSAA TSLSE+ETDEA
Subjt:  MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        AAARIGARVRVKVPL VYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

SwissProt top hits

e value

%identity

Alignment

P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic

6.1e-17

38.32

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Query:  SSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGR-RLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPL
        ++AS A   A +         R++ S++VC  S++       +  R R  +  EV+++SDS T       S++++   E+E  +    ++G +V+VK PL
Subjt:  SSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGR-RLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPL

Query:  KVYHVAKLPEANL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        KVYHV KLPE  L   M GV+K YV  WKGK +S N P+KVE+ + V  R  +K V HLKEEEFE +
Subjt:  KVYHVAKLPEANL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

P80680 Ferredoxin-thioredoxin reductase, variable chain

8.8e-24

58.95

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Query:  ATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PIKFVAHLKEEEFEYV
        A+  ++ EE   AAA +IG RVRV  PL+VYHV K P+ +++GMEGV+K YV VWKGKRV+AN P+KVEF + VEG+P P++F AHL+E+EFE+V
Subjt:  ATTSLSEEETDEAAAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PIKFVAHLKEEEFEYV

Arabidopsis top hits

e value

%identity

Alignment

AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2

1.4e-29

45.86

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Query:  IGLMPPPVPSSASVAARF-------ACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA
        I  + PP      VAA         + S ++F    + +S+  S C+ S    NP   +IR    + S  SV +D+  SSS        TSL  EE DE 
Subjt:  IGLMPPPVPSSASVAARF-------ACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        A  +IGARVRV VPLKVYHV ++PE  L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR P+KF  HLKE+EFE +
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1

3.0e-27

43.09

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Query:  MPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGR------RLFSEVSVRSD----SGTSSSATAVSAATTSLSEEETDEA
        M   +  S ++AA      +    S   ++ +++  +L S +V P +    + +      R  S  ++R D    S  S +A A  +++ S SEEE +  
Subjt:  MPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGR------RLFSEVSVRSD----SGTSSSATAVSAATTSLSEEETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV
        A A+IG+RVRV  PLKVYHV ++PE +LEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  +KFV+HLKE+EFE++
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATCGGTATTGCGAATAGTATCGGCCTGATGCCTCCGCCGGTACCGTCGTCGGCGTCGGTGGCTGCACGTTTTGCCTGTTCTATGACGGTATTCTCTACTTCTGATGT
TAGATCTTCCTTTTCGTCATCCGTTTGTTCTTTATCGTCAGTTGTTGTTAATCCTTTTAACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTTCAGTTAGAT
CAGATTCCGGAACTTCATCTTCAGCTACTGCTGTTTCGGCGGCGACAACGTCATTGTCGGAGGAAGAGACTGATGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGG
GTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGAGGCGAATCTTGAGGGAATGGAAGGAGTGCTTAAGGATTATGTTCGTGTTTGGAAGGGGAAGCGTGT
TTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCTGTTGAAGGTCGTCCACCAATCAAGTTTGTTGCTCATCTTAAGGAGGAAGAGTTTGAATACGTTTAA

mRNA sequence

Show/hide mRNA sequence

GTGGAAAATATCTGGTGAGGTAAGGCTGTGCGTTTGTGTGTGTGTGGACACCGCCAATAAATTAATAAAATAAAATTGAAGGAAGAAGAATTTTTTTAAAAAAACTCAAG
AAACCATATTCATTTCCTTCTTAGGCGAAAGAGTCCTCCAGCGGCACAGAAATGATCGGTATTGCGAATAGTATCGGCCTGATGCCTCCGCCGGTACCGTCGTCGGCGTC
GGTGGCTGCACGTTTTGCCTGTTCTATGACGGTATTCTCTACTTCTGATGTTAGATCTTCCTTTTCGTCATCCGTTTGTTCTTTATCGTCAGTTGTTGTTAATCCTTTTA
ACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTTCAGTTAGATCAGATTCCGGAACTTCATCTTCAGCTACTGCTGTTTCGGCGGCGACAACGTCATTGTCG
GAGGAAGAGACTGATGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGAGGCGAATCTTGAGGG
AATGGAAGGAGTGCTTAAGGATTATGTTCGTGTTTGGAAGGGGAAGCGTGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCTGTTGAAGGTCGTCCACCAA
TCAAGTTTGTTGCTCATCTTAAGGAGGAAGAGTTTGAATACGTTTAATCAGGCTTGTTATTCATCATCATCTTCTTCATTCTAATGAATCATCAAGCCAAGACAATTGTT
GTTTTTCCGATCTCAGTATTAATACCAAGCTTCCTTGTGCAGTATTATTGTCAACCTTTTAAGGTTTGATCTTCTTCTATAGTTCTATCTACACCATTTACGTTTTCCTT
TGTAATGTAGAAAAATTGCTCGAATGTTTTTCTTCTGAGCTAGTTAACTTTCTCGATTCTCGATTTGGCTTTGTAAAATAATTGCGCCAAGACAAGAGGAAATTTAATCA
TCTAATACATGTCTGATCCGAATGGTTTC

Protein sequence

Show/hide protein sequence

MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSIRRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVR
VKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEYV

IVF0026105 (gene) of Melon (IVF77) v1 genome