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IVF0026133 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026133
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionABC transporter F family member 4
Genome locationchr11:29975967..29976537
RNA-Seq ExpressionIVF0026133
SyntenyIVF0026133
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR003439 - ABC transporter-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY94382.1 general control non-repressible 4 [Actinidia rufa]7.71e-2360Show/hide
Query:  MNKKFEIYDKEVEAAKRD------------------LEAELNKR---------SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        MNKKFE+Y+K+V+AAKR                    EA  +K          SYPNR+DFRL+DVDVGIDMGTRVAI+GPNGAGKSTLLNLLAGDLVPT
Subjt:  MNKKFEIYDKEVEAAKRD------------------LEAELNKR---------SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT

KAA0039916.1 stress-associated endoplasmic reticulum protein 2-like [Cucumis melo var. makuwa]3.40e-35100Show/hide
Query:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
        MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
Subjt:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA

KAE8692933.1 ABC transporter F family member 4 [Hibiscus syriacus]1.14e-2468.24Show/hide
Query:  MNKKFEIYDKEVEAAKRD---LEAELNKRS---------YPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        MNKKFEIY+K+++AAKR    ++ E  KRS         YPN++DFRL+DVD+GIDMGTRVAIVGPNGAGKSTLLNL+AGDLVPT
Subjt:  MNKKFEIYDKEVEAAKRD---LEAELNKRS---------YPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT

KAG4183452.1 hypothetical protein ERO13_A09G110551v2 [Gossypium hirsutum]4.05e-2167.05Show/hide
Query:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQEPSIN-----------GGNTSSVSSSSSSRSRR
        SYPNR+DFRL+DVDVGIDMGTRVAIVGPNGAGKSTLLNL+AGDLVPT      +Q+  I            GG+ S+VS+SSSSRSRR
Subjt:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQEPSIN-----------GGNTSSVSSSSSSRSRR

TYK24584.1 ABC transporter F family member 4 [Cucumis melo var. makuwa]5.99e-36100Show/hide
Query:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
        MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
Subjt:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA

TrEMBL top hitse value%identityAlignment
A0A5A7TCU9 Stress-associated endoplasmic reticulum protein 2-like8.4e-28100Show/hide
Query:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
        MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
Subjt:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA

A0A5D2P1Y8 ABC transporter domain-containing protein4.6e-1866.29Show/hide
Query:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQEPSIN-----------GGNTSSVSSSSSSRSRRS
        SYPNR+DFRL+DVDVGIDMGTRVAIVGPNGAGKSTLLNL+AGDLVPT      +Q+  I            GG+ S+VS+SSSSRSRR+
Subjt:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQEPSIN-----------GGNTSSVSSSSSSRSRRS

A0A5D3DLW2 ABC transporter F family member 48.4e-28100Show/hide
Query:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
        MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA
Subjt:  MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLA

A0A6A2ZME9 ABC transporter F family member 41.3e-2062.77Show/hide
Query:  MNKKFEIYDKEVEAAKRD---LEAELNKR---------SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQE
        MNKKFEIY+K+++AAKR    ++ E  KR         SYPN++DFRL+DVD+GIDMGTRVAIVGPNGAGKSTLLNL+AGDLVPT      +Q+
Subjt:  MNKKFEIYDKEVEAAKRD---LEAELNKR---------SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQE

A0A7J0F6P0 General control non-repressible 41.9e-1960Show/hide
Query:  MNKKFEIYDKEVEAAKRD------------------LEAELNKR---------SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        MNKKFE+Y+K+V+AAKR                    EA  +K          SYPNR+DFRL+DVDVGIDMGTRVAI+GPNGAGKSTLLNLLAGDLVPT
Subjt:  MNKKFEIYDKEVEAAKRD------------------LEAELNKR---------SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT

SwissProt top hitse value%identityAlignment
O14134 mRNA export factor elf11.2e-0750Show/hide
Query:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR
        +YPN K   L +V VG+ + +RVAI+GPNGAGKSTL+ +L G+++P   +
Subjt:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR

Q2KJA2 ATP-binding cassette sub-family F member 22.7e-0769.44Show/hide
Query:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        +++ GID+ TRVA+VGPNGAGKSTLL LL G+L+PT
Subjt:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT

Q99LE6 ATP-binding cassette sub-family F member 22.7e-0769.44Show/hide
Query:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        +++ GID+ TRVA+VGPNGAGKSTLL LL G+L+PT
Subjt:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT

Q9M1H3 ABC transporter F family member 47.6e-1880.36Show/hide
Query:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQE
        SYPNR DFRL++VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT      +Q+
Subjt:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQE

Q9UG63 ATP-binding cassette sub-family F member 22.7e-0769.44Show/hide
Query:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        +++ GID+ TRVA+VGPNGAGKSTLL LL G+L+PT
Subjt:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT

Arabidopsis top hitse value%identityAlignment
AT1G64550.1 general control non-repressible 31.1e-0656.76Show/hide
Query:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTS
        +++ GID+ +R+A+VGPNG GKST+L L++GDL P+S
Subjt:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTS

AT3G54540.1 general control non-repressible 45.4e-1980.36Show/hide
Query:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQE
        SYPNR DFRL++VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT      +Q+
Subjt:  SYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQE

AT4G25450.1 non-intrinsic ABC protein 84.9e-0443.14Show/hide
Query:  SYPNRKDFRLAD-VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR
        +YP R D ++ D + + ++ GT  A+VG +GAGKST++ LLA    PT  R
Subjt:  SYPNRKDFRLAD-VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR

AT4G25450.2 non-intrinsic ABC protein 84.9e-0443.14Show/hide
Query:  SYPNRKDFRLAD-VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR
        +YP R D ++ D + + ++ GT  A+VG +GAGKST++ LLA    PT  R
Subjt:  SYPNRKDFRLAD-VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR

AT5G60790.1 ABC transporter family protein7.3e-0863.89Show/hide
Query:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        ++D G+D+ +RVA+VGPNGAGKSTLL L+ G+L PT
Subjt:  DVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAAAAGTTTGAGATATATGATAAGGAGGTAGAAGCTGCTAAGAGAGATCTGGAAGCAGAGCTCAACAAGAGAAGTTATCCAAATAGGAAAGATTTTAGACTTGC
TGATGTCGATGTAGGCATTGACATGGGAACACGTGTTGCTATTGTCGGACCGAATGGAGCAGGAAAATCAACTCTTTTGAATCTGCTAGCAGGTGATCTCGTTCCAACTT
CCAACAGAAGGGGAAGTACGCAGGAACCTTCTATCAATGGAGGAAACACCAGTTCAGTATCTTCTTCGTCTTCATCCCGATCAAGACGGTCTAAGCAAACAGGAAGCTGT
TCGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAAAAGTTTGAGATATATGATAAGGAGGTAGAAGCTGCTAAGAGAGATCTGGAAGCAGAGCTCAACAAGAGAAGTTATCCAAATAGGAAAGATTTTAGACTTGC
TGATGTCGATGTAGGCATTGACATGGGAACACGTGTTGCTATTGTCGGACCGAATGGAGCAGGAAAATCAACTCTTTTGAATCTGCTAGCAGGTGATCTCGTTCCAACTT
CCAACAGAAGGGGAAGTACGCAGGAACCTTCTATCAATGGAGGAAACACCAGTTCAGTATCTTCTTCGTCTTCATCCCGATCAAGACGGTCTAAGCAAACAGGAAGCTGT
TCGTGCTAA
Protein sequenceShow/hide protein sequence
MNKKFEIYDKEVEAAKRDLEAELNKRSYPNRKDFRLADVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQEPSINGGNTSSVSSSSSSRSRRSKQTGSC
SC