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IVF0026142 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026142
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:17735766..17736011
RNA-Seq ExpressionIVF0026142
SyntenyIVF0026142
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042367.1 retrotransposon protein [Cucumis melo var. makuwa]2.75e-1857.75Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV
        MS D+ + ++ ER  DGRNAS+ SKRK+ SQPVETT II++ MEYAN+ LN+IA+W I++ Q+AS T +EV
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV

KAA0047716.1 retrotransposon protein [Cucumis melo var. makuwa]2.88e-48100Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
        MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]1.02e-1757.75Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV
        M SDDIMGT+P+R+++GR  S+GSKRKQG Q VET +IIR+ ME++N+ L  I +W  +QRQDAS    EV
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV

KAA0063768.1 retrotransposon protein [Cucumis melo var. makuwa]9.58e-1656.34Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV
        MS D++MGT+    S GR  S+GSKRK+G Q V++  IIR+A+EY N  LN IA W ++QRQDAS T QEV
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV

TYK08370.1 retrotransposon protein [Cucumis melo var. makuwa]1.06e-47100Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
        MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN

TrEMBL top hitse value%identityAlignment
A0A5A7TKY0 Retrotransposon protein7.2e-1357.75Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV
        MS D+ + ++ ER  DGRNAS+ SKRK+ SQPVETT II++ MEYAN+ LN+IA+W I++ Q+AS T +EV
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV

A0A5A7U0G0 Retrotransposon protein1.6e-36100Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
        MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN

A0A5A7V469 Retrotransposon protein9.4e-1357.75Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV
        M SDDIMGT+P+R+++GR  S+GSKRKQG Q VET +IIR+ ME++N+ L  I +W  +QRQDAS    EV
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV

A0A5D3C2D3 Retrotransposon protein3.0e-1156.34Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV
        MS D++MGT+    S GR  S+GSKRK+G Q V++  IIR+A+EY N  LN IA W ++QRQDAS T QEV
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEV

A0A5D3CAJ4 Retrotransposon protein1.6e-36100Show/hide
Query:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
        MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN
Subjt:  MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTGACGACATAATGGGCACACAACCCGAACGTGCAAGTGATGGTAGGAATGCTTCAAACGGATCGAAGAGGAAGCAGGGAAGCCAGCCAGTAGAAACTACGAA
AATCATTCGTAGTGCCATGGAATACGCCAATAACCATCTTAACCACATTGCAGACTGGTCGATCATACAACGCCAAGATGCAAGCGTAACATGGCAAGAGGTGTCGTTCT
ACAGTTACAGGGAATCCTCGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCTGACGACATAATGGGCACACAACCCGAACGTGCAAGTGATGGTAGGAATGCTTCAAACGGATCGAAGAGGAAGCAGGGAAGCCAGCCAGTAGAAACTACGAA
AATCATTCGTAGTGCCATGGAATACGCCAATAACCATCTTAACCACATTGCAGACTGGTCGATCATACAACGCCAAGATGCAAGCGTAACATGGCAAGAGGTGTCGTTCT
ACAGTTACAGGGAATCCTCGAACTGA
Protein sequenceShow/hide protein sequence
MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN