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IVF0026146 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026146
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:17144163..17144657
RNA-Seq ExpressionIVF0026146
SyntenyIVF0026146
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]1.20e-4754.09Show/hide
Query:  VETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQRQD
        +++F DVGSN P GY+ F AD   DM+ P MY+QG++M SDD+MGTR     E R  SSGSKRK+ G + ++ +IIR ++E+ N++L  I EW  +QRQD
Subjt:  VETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQRQD

Query:  ASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN
        AS    EVVRQL+ IPEL+  DR R M+ILM NVDDMKAFLD+ + +K  YC+II Q+N
Subjt:  ASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]1.99e-4651.55Show/hide
Query:  GCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQR
        G  E+F D+GSN P GY+ F+ADD +D +   MYS G++M  DD+M TR  R +E R  SSGSKRK+ G A ++ +I+R  ME+ N++L  I EW  +QR
Subjt:  GCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQR

Query:  QDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN
        QDA+    E+VRQL+ IPEL+  DR R M+I+M NVDDMKAFL++ D +K  YC+II Q+N
Subjt:  QDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN

KAA0055439.1 retrotransposon protein [Cucumis melo var. makuwa]4.59e-4652.76Show/hide
Query:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
        M G  E+F DVGSN P GY+        D + P MYSQG++M  DD+MGTR  R  E +  SSGSKRK+ G +V++ +IIR  +E+ N++L  IVEW  +
Subjt:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV

Query:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN
        Q QDAS    EVVRQL+ IPEL+  DR   M+ILM NVDDMKAFLD+ D +K  YC+II Q+N
Subjt:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]1.11e-112100Show/hide
Query:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
        MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
Subjt:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV

Query:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA
        QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA
Subjt:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA

TYK11924.1 retrotransposon protein [Cucumis melo var. makuwa]8.29e-4958.55Show/hide
Query:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
        M G  + F DVGSN P GYEGF  D  NDMEIP MYS+G+DM +  I GTR   + E R G S SK+K+GGQ++ET+EIIRNVME++ND+LKAI EW NV
Subjt:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV

Query:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELK
        Q QDAS    E VRQLQ I ELSR D+   + +LM NV+DMKA LD+ D++ 
Subjt:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELK

TrEMBL top hitse value%identityAlignment
A0A5A7TDD6 Retrotransposon protein2.9e-3754.09Show/hide
Query:  VETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQRQD
        +++F DVGSN P GY+ F AD   DM+ P MY+QG++M SDD+MGTR     E R  SSGSKRK+ G + ++ +IIR ++E+ N++L  I EW  +QRQD
Subjt:  VETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQRQD

Query:  ASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN
        AS    EVVRQL+ IPEL+  DR R M+ILM NVDDMKAFLD+ + +K  YC+II Q+N
Subjt:  ASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN

A0A5A7TYQ6 Retrotransposon protein5.5e-3651.55Show/hide
Query:  GCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQR
        G  E+F D+GSN P GY+ F+ADD +D +   MYS G++M  DD+M TR  R +E R  SSGSKRK+ G A ++ +I+R  ME+ N++L  I EW  +QR
Subjt:  GCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQR

Query:  QDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN
        QDA+    E+VRQL+ IPEL+  DR R M+I+M NVDDMKAFL++ D +K  YC+II Q+N
Subjt:  QDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN

A0A5A7V469 Retrotransposon protein2.9e-85100Show/hide
Query:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
        MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
Subjt:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV

Query:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA
        QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA
Subjt:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA

A0A5D3CL79 Retrotransposon protein5.0e-3758.94Show/hide
Query:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV
        M G  + F DVGSN P GYEGF  D  NDMEIP MYS+G+DM +  I GTR   + E R G S SK+K+GGQ++ET+EIIRNVME++ND+LKAI EW NV
Subjt:  MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNV

Query:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDEL
        Q QDAS    E VRQLQ I ELSR D+   + +LM NV+DMKA LD+ D++
Subjt:  QRQDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDEL

A0A5D3E474 Retrotransposon protein1.2e-3551.55Show/hide
Query:  GCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQR
        G  E F D+GSN P GY+ F AD   D   P MYS G++M  DD+M TR  R +E R  SSGSKRK+ G A ++ +I+R  +E+ N++L  I EW  +QR
Subjt:  GCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQR

Query:  QDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN
        QDAS    E+VRQL+ IP+L+  DR R M ILM NVDDMKAFL++ D +K  YC+II Q+N
Subjt:  QDASARLVEVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGCGTAGAGACATTCACCGATGTGGGGTCGAATTTTCCTGAAGGGTACGAGGGATTTTCTGCTGACGATGGAAACGATATGGAGATCCCTATGATGTATAG
TCAAGGAATAGACATGTTGTCTGATGACATCATGGGCACACGACCCGATCGCTCAACTGAGGGTAGGACTGGTTCAAGCGGGTCGAAGAGGAAGCAGGGAGGTCAGGCGG
TAGAAACTATGGAAATCATTCGCAATGTAATGGAACATTCAAATGACCGATTGAAGGCCATTGTAGAATGGTTGAATGTACAACGCCAAGATGCAAGCGCAAGACTTGTG
GAAGTCGTTAGACAGTTGCAGAGAATACCTGAACTAAGTAGATATGACAGGGTTCGCAGTATGCAGATACTTATGTGCAATGTGGACGACATGAAAGCATTCTTGGACAT
ACTCGATGAGCTTAAATTGGACTATTGCACGATCATTTTCCAAGATAACGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGCGTAGAGACATTCACCGATGTGGGGTCGAATTTTCCTGAAGGGTACGAGGGATTTTCTGCTGACGATGGAAACGATATGGAGATCCCTATGATGTATAG
TCAAGGAATAGACATGTTGTCTGATGACATCATGGGCACACGACCCGATCGCTCAACTGAGGGTAGGACTGGTTCAAGCGGGTCGAAGAGGAAGCAGGGAGGTCAGGCGG
TAGAAACTATGGAAATCATTCGCAATGTAATGGAACATTCAAATGACCGATTGAAGGCCATTGTAGAATGGTTGAATGTACAACGCCAAGATGCAAGCGCAAGACTTGTG
GAAGTCGTTAGACAGTTGCAGAGAATACCTGAACTAAGTAGATATGACAGGGTTCGCAGTATGCAGATACTTATGTGCAATGTGGACGACATGAAAGCATTCTTGGACAT
ACTCGATGAGCTTAAATTGGACTATTGCACGATCATTTTCCAAGATAACGCTTAA
Protein sequenceShow/hide protein sequence
MRGCVETFTDVGSNFPEGYEGFSADDGNDMEIPMMYSQGIDMLSDDIMGTRPDRSTEGRTGSSGSKRKQGGQAVETMEIIRNVMEHSNDRLKAIVEWLNVQRQDASARLV
EVVRQLQRIPELSRYDRVRSMQILMCNVDDMKAFLDILDELKLDYCTIIFQDNA