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IVF0026179 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026179
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:18982562..18982714
RNA-Seq ExpressionIVF0026179
SyntenyIVF0026179
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031645.1 hypothetical protein E6C27_scaffold139G004180 [Cucumis melo var. makuwa]1.96e-23100Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
        MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]5.86e-1678Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATLEEEI EHKD++DSSKSDRHWKRPLKKAKVS DDPD++     GSP
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]6.76e-1782Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATLEEEIKEHKD+SDSSKSD HWKRPLKKAKVSGDDPD K     G P
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
KAA0054388.1 hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa]3.70e-1782Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATL+EEIKEHKD+SDSSKSDRHWKRPLKKAKVSGDDPD +    FG P
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
KAA0054598.1 hypothetical protein E6C27_scaffold24G003990 [Cucumis melo var. makuwa]7.13e-1777.08Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
        M ATLEEE+KE+KD+SDSSKSDRHWKRPLKKAKVSGDDPD +    +G
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
TrEMBL top hitse value%identityAlignment
A0A5D3BCT1 Uncharacterized protein5.8e-1382Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATL+EEIKEHKD+SDSSKSDRHWKRPLKKAKVSGDDPD +    FG P
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
A0A5D3BGR0 Uncharacterized protein8.4e-1276Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATLEEEIKEHKD+SDSSK+DRHWKRPLKKAK+ GDDPD++     G P
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
A0A5D3BZ74 Uncharacterized protein1.0e-17100Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
        MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFG
A0A5D3C961 Uncharacterized protein1.3e-1282Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATLEEEIKEHKD+SDSSKSD HWKRPLKKAKVSGDDPD K     G P
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
A0A5D3D2A0 PMD domain-containing protein3.8e-1278Show/hide
Query:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
        MAATLEEEI EHKD++DSSKSDRHWKRPLKKAKVS DDPD++     GSP
Subjt:  MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTACTCTCGAAGAGGAGATAAAGGAGCATAAAGATGATAGCGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGTATCAGGTGA
TGATCCCGACAAGAAGAGGTTAAAATGCTTTGGGAGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTACTCTCGAAGAGGAGATAAAGGAGCATAAAGATGATAGCGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGTATCAGGTGA
TGATCCCGACAAGAAGAGGTTAAAATGCTTTGGGAGTCCCTAA
Protein sequenceShow/hide protein sequence
MAATLEEEIKEHKDDSDSSKSDRHWKRPLKKAKVSGDDPDKKRLKCFGSP