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IVF0026192 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026192
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr01:9150231..9150710
RNA-Seq ExpressionIVF0026192
SyntenyIVF0026192
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036773.1 uncharacterized protein E6C27_scaffold20G00570 [Cucumis melo var. makuwa]1.07e-5369.85Show/hide
Query:  VPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRNDVPVVKSPVAARSHATDEHVG
        V AKS + ++  + HES S +DVF PTPGH PTTN EA P  RSP +QSSIQVD SVTNQ  V +HNP+D+ST+ VGRNDV VV+SP AA S A +EHV 
Subjt:  VPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRNDVPVVKSPVAARSHATDEHVG

Query:  PTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV
        PTDTCATNTVELDVNDELQ ETQQS GVSRP GKKV
Subjt:  PTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV

KAA0048750.1 uncharacterized protein E6C27_scaffold43G00540 [Cucumis melo var. makuwa]6.74e-107100Show/hide
Query:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
        MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
Subjt:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG

Query:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV
        RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV
Subjt:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV

KAA0051363.1 uncharacterized protein E6C27_scaffold55G00870 [Cucumis melo var. makuwa]3.75e-4660.26Show/hide
Query:  ERDDV--PLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRN
        E DDV   LAR LKKGLF  VVP KS D   STH HES  ++D+FVPTPGH   TNE A    RSP ++SSIQV+ SV +QRLVPE NPVD+STK VGRN
Subjt:  ERDDV--PLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRN

Query:  DVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK
        DV V +SP       TD HV P +TC T+T+E DVN++ Q ETQ   GVSRP GKK
Subjt:  DVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK

KAA0065524.1 gag/pol protein [Cucumis melo var. makuwa]3.02e-5668.35Show/hide
Query:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
        MD +ERDDVPLARLLKKGLFSNVVPAKS D   STH HES S KD+FVPTP H PTTNE A     SPLV+SSIQVD SVT+ RLVP+ NP+D++T+ VG
Subjt:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG

Query:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK
        RNDVPV +S +       D HV  T+TCAT+T+E DVNDELQ ETQQS GVSRP GKK
Subjt:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK

TYK29294.1 gag/pol protein [Cucumis melo var. makuwa]2.49e-5667.72Show/hide
Query:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
        MD +ERDDVPLARLLKKGLFSNVVPAKS D   STH HES S KD+FVPTP H PTTNE A     SPLV+SSIQVD S+T+ RLVP+ NP+D++T+ VG
Subjt:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG

Query:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK
        RNDVPV +S +       D HV  T+TCAT+T+E DVNDELQ ETQQS GVSRP GKK
Subjt:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK

TrEMBL top hitse value%identityAlignment
A0A5A7T1I3 Uncharacterized protein1.5e-4169.85Show/hide
Query:  VPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRNDVPVVKSPVAARSHATDEHVG
        V AKS + ++  + HES S +DVF PTPGH PTTN EA P  RSP +QSSIQVD SVTNQ  V +HNP+D+ST+ VGRNDV VV+SP AA S A +EHV 
Subjt:  VPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRNDVPVVKSPVAARSHATDEHVG

Query:  PTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV
        PTDTCATNTVELDVNDELQ ETQQS GVSRP GKKV
Subjt:  PTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV

A0A5A7U645 Uncharacterized protein1.3e-3760.26Show/hide
Query:  ERDDV--PLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRN
        E DDV   LAR LKKGLF  VVP KS D   STH HES  ++D+FVPTPGH   TNE A    RSP ++SSIQV+ SV +QRLVPE NPVD+STK VGRN
Subjt:  ERDDV--PLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRN

Query:  DVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK
        DV V +SP       TD HV P +TC T+T+E DVN++ Q ETQ   GVSRP GKK
Subjt:  DVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK

A0A5A7VE22 Gag/pol protein1.0e-4768.35Show/hide
Query:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
        MD +ERDDVPLARLLKKGLFSNVVPAKS D   STH HES S KD+FVPTP H PTTNE A     SPLV+SSIQVD SVT+ RLVP+ NP+D++T+ VG
Subjt:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG

Query:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK
        RNDVPV +S +       D HV  T+TCAT+T+E DVNDELQ ETQQS GVSRP GKK
Subjt:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK

A0A5D3E0G7 Gag/pol protein1.8e-4767.72Show/hide
Query:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
        MD +ERDDVPLARLLKKGLFSNVVPAKS D   STH HES S KD+FVPTP H PTTNE A     SPLV+SSIQVD S+T+ RLVP+ NP+D++T+ VG
Subjt:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG

Query:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK
        RNDVPV +S +       D HV  T+TCAT+T+E DVNDELQ ETQQS GVSRP GKK
Subjt:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKK

A0A5D3E8I4 Uncharacterized protein1.0e-82100Show/hide
Query:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
        MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG
Subjt:  MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVG

Query:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV
        RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV
Subjt:  RNDVPVVKSPVAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGACGAGCGAGACGATGTTCCTTTAGCCAGATTGTTAAAGAAAGGGTTATTTTCCAATGTTGTCCCAGCTAAATCTTTTGATCTTGACATGTCAACTCATCC
TCATGAGAGCTTCTCCTCTAAAGATGTATTTGTTCCAACACCGGGTCATCTGCCTACGACAAATGAAGAAGCTAGTCCATTACATCGTTCACCACTGGTTCAGTCATCGA
TTCAGGTTGATGGTTCTGTTACAAATCAGCGGTTAGTGCCTGAACATAATCCTGTTGATGAATCTACTAAGATTGTGGGAAGGAATGATGTTCCTGTTGTTAAGTCTCCG
GTTGCTGCTCGGTCTCATGCTACTGATGAACATGTCGGCCCGACTGATACTTGTGCAACGAATACTGTTGAACTAGATGTTAATGATGAACTCCAATCAGAGACTCAACA
ATCTTCTGGTGTATCTAGGCCAAATGGAAAGAAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGACGAGCGAGACGATGTTCCTTTAGCCAGATTGTTAAAGAAAGGGTTATTTTCCAATGTTGTCCCAGCTAAATCTTTTGATCTTGACATGTCAACTCATCC
TCATGAGAGCTTCTCCTCTAAAGATGTATTTGTTCCAACACCGGGTCATCTGCCTACGACAAATGAAGAAGCTAGTCCATTACATCGTTCACCACTGGTTCAGTCATCGA
TTCAGGTTGATGGTTCTGTTACAAATCAGCGGTTAGTGCCTGAACATAATCCTGTTGATGAATCTACTAAGATTGTGGGAAGGAATGATGTTCCTGTTGTTAAGTCTCCG
GTTGCTGCTCGGTCTCATGCTACTGATGAACATGTCGGCCCGACTGATACTTGTGCAACGAATACTGTTGAACTAGATGTTAATGATGAACTCCAATCAGAGACTCAACA
ATCTTCTGGTGTATCTAGGCCAAATGGAAAGAAGGTTTAG
Protein sequenceShow/hide protein sequence
MDSDERDDVPLARLLKKGLFSNVVPAKSFDLDMSTHPHESFSSKDVFVPTPGHLPTTNEEASPLHRSPLVQSSIQVDGSVTNQRLVPEHNPVDESTKIVGRNDVPVVKSP
VAARSHATDEHVGPTDTCATNTVELDVNDELQSETQQSSGVSRPNGKKV