; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026205 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026205
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:20023239..20023591
RNA-Seq ExpressionIVF0026205
SyntenyIVF0026205
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046997.1 retrotransposon protein [Cucumis melo var. makuwa]4.90e-57100Show/hide
Query:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL
        MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL
Subjt:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL

KAA0060332.1 retrotransposon protein [Cucumis melo var. makuwa]3.46e-3064.37Show/hide
Query:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNA----MYSQGIDVSQENVRA
        +EKE+ D WV  +P AK LLNKPFPYY+EL Y F RDR MG FA+TF D+GSNEP  YEGFDM +GN     +YSQGID+SQ++VRA
Subjt:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNA----MYSQGIDVSQENVRA

KAA0063924.1 retrotransposon protein [Cucumis melo var. makuwa]3.22e-2960.47Show/hide
Query:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGN----AMYSQGIDVSQENVRA
        EK+V+D WV  +P AK +LNK  PYY+ELAY F RDR  G F ETFT++G NEP  YEGFDM +GN    ++YSQGID+SQ++VRA
Subjt:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGN----AMYSQGIDVSQENVRA

KAA0065477.1 retrotransposon protein [Cucumis melo var. makuwa]2.59e-2963.22Show/hide
Query:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTR-YEGFDMLNGNA----MYSQGIDVSQENVRA
        EKE+ D WV  +P AKGLLNKPFPYY+EL Y FGRDR  G FAETF D+GSNEP   Y+ FDM +GN     +YSQG+D+SQ++VRA
Subjt:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTR-YEGFDMLNGNA----MYSQGIDVSQENVRA

TYJ97579.1 retrotransposon protein [Cucumis melo var. makuwa]6.79e-3063.22Show/hide
Query:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGNA----MYSQGIDVSQENVRA
        EKE+ D WV  +P AKGL+NKPFPYY+EL Y FGR+R  G FAETF D+GSNEP  RY+ FDM +GN     +YSQG+D+SQ+NVRA
Subjt:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGNA----MYSQGIDVSQENVRA

TrEMBL top hitse value%identityAlignment
A0A5A7TYJ9 Retrotransposon protein2.0e-42100Show/hide
Query:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL
        MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL
Subjt:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL

A0A5A7UWV7 Retrotransposon protein9.4e-2464.37Show/hide
Query:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGN----AMYSQGIDVSQENVRA
        +EKE+ D WV  +P AK LLNKPFPYY+EL Y F RDR MG FA+TF D+GSNEP  YEGFDM +GN     +YSQGID+SQ++VRA
Subjt:  MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGN----AMYSQGIDVSQENVRA

A0A5A7VHE7 Retrotransposon protein6.1e-2363.22Show/hide
Query:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGN----AMYSQGIDVSQENVRA
        EKE+ D WV  +P AKGL+NKPFPYY+EL Y FGR+R  G FAETF D+GSNEP  RY+ FDM +GN     +YSQG+D+SQ+NVRA
Subjt:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGN----AMYSQGIDVSQENVRA

A0A5D3BEV4 Retrotransposon protein6.1e-2363.22Show/hide
Query:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGN----AMYSQGIDVSQENVRA
        EKE+ D WV  +P AKGL+NKPFPYY+EL Y FGR+R  G FAETF D+GSNEP  RY+ FDM +GN     +YSQG+D+SQ+NVRA
Subjt:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGN----AMYSQGIDVSQENVRA

A0A5D3DQQ3 Retrotransposon protein6.1e-2363.22Show/hide
Query:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGN----AMYSQGIDVSQENVRA
        EKE+ D WV  +P AKGL+NKPFPYY+EL Y FGR+R  G FAETF D+GSNEP  RY+ FDM +GN     +YSQG+D+SQ+NVRA
Subjt:  EKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPT-RYEGFDMLNGN----AMYSQGIDVSQENVRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGAAGTCTTAGATTACTGGGTTATGTTGTATCCTACAGCGAAGGGGCTCCTTAACAAACCCTTTCCCTATTACAACGAACTTGCATATGAGTTTGGACGCGA
TAGAGTAATGGGTTGCTTCGCTGAGACATTCACTGACATCGGGTCTAACGAGCCTACCAGATATGAGGGATTTGACATGCTTAATGGGAACGCCATGTACAGCCAGGGGA
TTGACGTGTCCCAGGAGAATGTACGTGCATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGAAGTCTTAGATTACTGGGTTATGTTGTATCCTACAGCGAAGGGGCTCCTTAACAAACCCTTTCCCTATTACAACGAACTTGCATATGAGTTTGGACGCGA
TAGAGTAATGGGTTGCTTCGCTGAGACATTCACTGACATCGGGTCTAACGAGCCTACCAGATATGAGGGATTTGACATGCTTAATGGGAACGCCATGTACAGCCAGGGGA
TTGACGTGTCCCAGGAGAATGTACGTGCATTATGA
Protein sequenceShow/hide protein sequence
MEKEVLDYWVMLYPTAKGLLNKPFPYYNELAYEFGRDRVMGCFAETFTDIGSNEPTRYEGFDMLNGNAMYSQGIDVSQENVRAL