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IVF0026231 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026231
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:15172609..15172776
RNA-Seq ExpressionIVF0026231
SyntenyIVF0026231
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054337.1 retrotransposon protein [Cucumis melo var. makuwa]1.62e-29100Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]3.21e-3096.36Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDEDEG+STY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]3.21e-3094.55Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+D+DDEDEG+STYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]6.48e-3094.55Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDEDEG+STYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK11987.1 retrotransposon protein [Cucumis melo var. makuwa]2.64e-2994.55Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC DVDDEDEG+STYATTTASEDIQYIETTNEWSQWR+DLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SZH3 Retrotransposon protein4.4e-2296.36Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDED+G+STYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7U4G2 Retrotransposon protein7.5e-2296.36Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDEDEG+STYATTTASEDIQYIETTNEWSQW DDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7UID8 Retrotransposon protein5.2e-23100Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7UZF0 Retrotransposon protein5.8e-2296.36Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCEDVDDEDEG+STY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein5.8e-2294.55Show/hide
Query:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+D+DDEDEG+STYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGAGGACGTTGACGACGAGGACGAGGGGAACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAATGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGAGGACGTTGACGACGAGGACGAGGGGAACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAATGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAATGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVDDEDEGNSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA