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IVF0026241 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026241
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionsequence-specific DNA binding transcription factors;transcription regulators
Genome locationchr05:21887667..21888831
RNA-Seq ExpressionIVF0026241
SyntenyIVF0026241
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY31590.1 Uncharacterized protein TCM_038540 [Theobroma cacao]3.76e-0635.16Show/hide
Query:  FRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYG
         RS+R      K+   R R+L+   L+    SS  S  ++ + ++L+ LQR++P    E N+  LF RTA+YI  L+ K+++L++L++FYG
Subjt:  FRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYG
KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]4.72e-5591.35Show/hide
Query:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVS------TPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
        MRSIHSFRSRRQATTISKLKPSRRRR+KLLHL KHTSSS VS      TPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
Subjt:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVS------TPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
KAG2692204.1 hypothetical protein I3760_08G041500 [Carya illinoinensis]1.27e-0640Show/hide
Query:  RRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYG
        R RR K L L+    SS ++T  +++ ++L+ LQR++PG   E ++ +LF R A+YI  L+ K+N+LK+L++ YG
Subjt:  RRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYG
KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]2.56e-4576.19Show/hide
Query:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPV-------STPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLT
        MRSIHSFR RRQAT+ + LKP+RRRRLKL+HL K+T+SS         +TPS AMHKRLRNLQRLVPGH H+T+LNHLFQRTADYI ALQLKLNILKDLT
Subjt:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPV-------STPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL
OMP08066.1 hypothetical protein COLO4_06805 [Corchorus olitorius]1.87e-0736.08Show/hide
Query:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYG
        MRS  S R RR+   +++ +  R R++ L +L  + +S   S  ++ + ++L  LQR++P   +E N++ LFQ TADYI  L+ K+++L++L++FYG
Subjt:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYG
TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein3.4e-4191.35Show/hide
Query:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVS------TPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
        MRSIHSFRSRRQATTISKLKPSRRRR+KLLHL KHTSSS VS      TPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
Subjt:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVS------TPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
A0A1R3KLV4 Uncharacterized protein4.3e-0435.71Show/hide
Query:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL
        MRS  S R RR+   +++ +  R R++ L +L  + +S   S    ++ ++L  LQR++P   +E N++ LFQ TADYI  L+ K+++L++L++FYG+
Subjt:  MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators1.1e-0432.39Show/hide
Query:  SRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDL
        +RR  +K + +    S      P  A+H+R++ L+ LVP       L+ LF++TADYI AL++K+ +++ +
Subjt:  SRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCTATTCACTCATTCCGATCAAGAAGACAGGCTACCACCATTTCCAAACTCAAACCATCAAGGAGAAGAAGGTTAAAGCTTCTTCACCTCACAAAACACACCTC
CTCCTCCCCCGTCTCCACTCCATCTGCTGCCATGCACAAGAGGCTGAGAAATCTTCAGAGGCTGGTCCCTGGCCACACCCATGAAACCAATCTCAACCACTTGTTTCAAA
GAACTGCTGATTACATCCATGCTTTACAACTTAAGCTCAACATTCTCAAAGATCTCACCTCTTTCTATGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
CTCCAACCACCTCTCTCTATACACACGCTTGGAAACTTTTTGATTATTTGCCTATATAAACACACACTCACACACACTTCAACAATACACAAGCAATCCATCTCTTTCTC
CTCTCTCTCTCTTCATATTAGGAAGCAAAGTATCCCACGCAAAAATGAGGTCTATTCACTCATTCCGATCAAGAAGACAGGCTACCACCATTTCCAAACTCAAACCATCA
AGGAGAAGAAGGTTAAAGCTTCTTCACCTCACAAAACACACCTCCTCCTCCCCCGTCTCCACTCCATCTGCTGCCATGCACAAGAGGCTGAGAAATCTTCAGAGGCTGGT
CCCTGGCCACACCCATGAAACCAATCTCAACCACTTGTTTCAAAGAACTGCTGATTACATCCATGCTTTACAACTTAAGCTCAACATTCTCAAAGATCTCACCTCTTTCT
ATGGCCTTTGAATCATATCGTTTTCTTATTATTATTAGTAGGCTAAGTTATAACAAATAGTCTTCAATTTTCTTCTTTGTTTCAAAATTATCCTCCATACTTTCAAAAGC
TGCAATATTATCCTTAAACTATCCTAAACAATTACAAAACTATTCTTGAGAGTATAATATTTTATTTTAGAAATTTCCGATAGAGAATTGAATGTTTAGAAAACTACATG
TGATAATGACTTAAAACGATGTAGTGACTCAAATTTTTGTTCTTTATTCATTATGTCACTTGCTACCCAATTTCGTATCTTAGTTTCTATCCAAATTCTTAAAGATTTCT
ATTTCAAGAGTATTTTTTGAATGTTTATGAAAATTTAAGGATAATATTGTAATTTTTGAAAGTATGATGATGTATTTTAAACAAATGAAAAAGTTTGAGGGTATTTTTTA
TAATTTAAACTTATTATTATTCTAAAATAATTAGGTTCTCTTATGCTTGAATATATTAATTTTAATTAGTATTCTATGTAGGCTCTCTCTCTCTCTATATATATATTTTA
TATGTCTTTAATTTTAAGCTCCCCCCTCTTTCTTAGCCTTAGGGGAAATTATGTAGTTAAGTTTCTAATCATTGAGAGCCTACAATGGCCTAAATGTCCTTTGGCGGAAA
ATAAAAGGAATCGAAATATGTTATATTTATGCAATTATTTATTATTATTATTCCTTATGTAAATA
Protein sequenceShow/hide protein sequence
MRSIHSFRSRRQATTISKLKPSRRRRLKLLHLTKHTSSSPVSTPSAAMHKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL