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IVF0026244 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026244
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionselenoprotein H
Genome locationchr03:23681672..23685735
RNA-Seq ExpressionIVF0026244
SyntenyIVF0026244
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652181.1 hypothetical protein Csa_022241 [Cucumis sativus]1.11e-8785.06Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTG-----------CEDKQCQS
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL  +             C  KQCQS
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTG-----------CEDKQCQS

Query:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Subjt:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

XP_004138763.1 selenoprotein H [Cucumis sativus]8.54e-8985.06Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTG-----------CEDKQCQS
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL  +             C  KQCQS
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTG-----------CEDKQCQS

Query:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Subjt:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

XP_008445096.1 PREDICTED: selenoprotein H [Cucumis melo]1.38e-9490.23Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLEN-----------MTGCEDKQCQS
        MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLE            +  C  KQCQS
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLEN-----------MTGCEDKQCQS

Query:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
Subjt:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]6.72e-7374.01Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCEDK----------Q
        MAP+KRSK QE+E+A  KP PA+SR TR S RLAANSKADLTV E    LPK KKAKRAPKENGK EEVEN+   +D   E + G E K          Q
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCEDK----------Q

Query:  CQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        CQSFKKRAI+VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Subjt:  CQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

XP_038886764.1 selenoprotein H [Benincasa hispida]1.05e-7676.97Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTG-----------CEDK
        MAPRKRSKNQE+E A EK APA+SRVTRSSARLAANSKAD  V    TE  KSKKAKRAPKENGKV+EVEN+ V+VD  LE +             C  K
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTG-----------CEDK

Query:  QCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        QCQSFKKRAIQVQ GLENGVPGITV+LNPD PRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Subjt:  QCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

TrEMBL top hitse value%identityAlignment
A0A0A0LPC9 Uncharacterized protein1.1e-6885.47Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED---------KQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL  +              KQCQSFK
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED---------KQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

A0A1S3BBW1 selenoprotein H4.3e-7390.23Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLEN-----------MTGCEDKQCQS
        MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLE            +  C  KQCQS
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLEN-----------MTGCEDKQCQS

Query:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
Subjt:  FKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

A0A6J1GHF7 selenoprotein H-like isoform X16.2e-5672.88Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED----------KQ
        MAP+KRSK QE+E+A+ KP PA+SRVTR S RLA NSKADLTV E    LPK KKAKR PKENGK EEVEN+   +D   E + G E           KQ
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED----------KQ

Query:  CQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        CQSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Subjt:  CQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

A0A6J1K9R2 selenoprotein H-like2.5e-5268.72Show/hide
Query:  MAPRKRSKNQEEE---SAMEKPAPATSRVTRSSARLAANSKADL----TVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED---------
        MAPRKRSKNQE++   +A EKPAP +S VTR S RLA NS ADL     VTELPKSKK KRAPKENGK +EV N+  ++D   + ++             
Subjt:  MAPRKRSKNQEEE---SAMEKPAPATSRVTRSSARLAANSKADL----TVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED---------

Query:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        KQCQSFKKRAIQVQ+GLENGV GITVLLNP+KPR+GCFEIRS+DG+KFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Subjt:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

A0A6J1KP64 selenoprotein H-like isoform X15.8e-5471.75Show/hide
Query:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED----------KQ
        MAP+KRSK QE+E+A  KP P +SRVTR S RLAANSKADLTV E    LPK KKAKRAPKEN K EEVEN+   +D   E + G E           KQ
Subjt:  MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCED----------KQ

Query:  CQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG
        CQSFKKRA++VQ GLE GVPGITVLLNPDK RRGCFEIRSEDG+KFISLLDMKRPFT+MKELDM+EVISDIIEKIKG
Subjt:  CQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24440.1 selenium binding3.0e-2645.57Show/hide
Query:  KRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCEDKQCQSFKKRAIQVQTGLENG
        KR  +  +   +E P     + T++    AA  K       + K + A +  KE  + ++   KE   D   + +     KQC+SFK+RA +V+ GLE  
Subjt:  KRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCEDKQCQSFKKRAIQVQTGLENG

Query:  VPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIK
        VPGI V +NPDKPRRGCFEIR E G+ FISLL MKRPFT MKEL+M+EVI+DI+EKIK
Subjt:  VPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIK

AT4G31360.1 selenium binding1.1e-2848.39Show/hide
Query:  PRKRSKNQEEESAMEKPAPATSRVTRS------SARLAANSKADLTVTELPKSKKAKR--------APKENGKVEEVENKEVKVDVGLE-NMTGCED---
        P K+SK   EE A      A+SRVTRS      S      +KA  + T+ P +KKAKR          K+  K EEVE  E  V+  +E      ED   
Subjt:  PRKRSKNQEEESAMEKPAPATSRVTRS------SARLAANSKADLTVTELPKSKKAKR--------APKENGKVEEVENKEVKVDVGLE-NMTGCED---

Query:  --------KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIK
                KQC +FK RAIQV+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL+MKRPF  MK LDM+EVI DII+K+K
Subjt:  --------KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCTAGGAAGCGAAGCAAGAACCAAGAAGAAGAGTCGGCGATGGAGAAGCCGGCCCCGGCGACGTCCAGGGTGACTCGGAGTTCCGCTCGGCTGGCGGCGAACTC
CAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAAGTCGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATG
TTGGTTTGGAGAACATGACAGGATGCGAAGACAAACAGTGTCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTG
CTGCTTAACCCCGATAAGCCAAGAAGGGGTTGCTTTGAGATCCGAAGCGAAGATGGCAAGAAATTTATCAGTCTTCTGGACATGAAGCGTCCATTTACCCGCATGAAGGA
ACTGGACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCTAGGAAGCGAAGCAAGAACCAAGAAGAAGAGTCGGCGATGGAGAAGCCGGCCCCGGCGACGTCCAGGGTGACTCGGAGTTCCGCTCGGCTGGCGGCGAACTC
CAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAAGTCGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATG
TTGGTTTGGAGAACATGACAGGATGCGAAGACAAACAGTGTCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTAGAGAATGGTGTTCCTGGAATTACTGTG
CTGCTTAACCCCGATAAGCCAAGAAGGGGTTGCTTTGAGATCCGAAGCGAAGATGGCAAGAAATTTATCAGTCTTCTGGACATGAAGCGTCCATTTACCCGCATGAAGGA
ACTGGACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGA
Protein sequenceShow/hide protein sequence
MAPRKRSKNQEEESAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLENMTGCEDKQCQSFKKRAIQVQTGLENGVPGITV
LLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG