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IVF0026247 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026247
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase, catalytic core
Genome locationchr12:6923204..6923473
RNA-Seq ExpressionIVF0026247
SyntenyIVF0026247
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.86e-3677.53Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SNSNQVELDNVFYVL MKKNLV VSQLTSA NF+VFG ++VKVYH L+VSGT LMEGRRMDSIYV+S E  YINK + NET +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.15e-3782.02Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVPHSNSNQVELDNVFYV GMKKNLV VSQLTSA NFVVFGLDDVKVYH L+VSG+ LMEGRRMDSIYV+S + AY+NK R NET +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.37e-3576.4Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SN NQVELDNVFYV GMKKNLV +SQLTS GNFVVFG +DVKVYH  +VSGT L+EGRRMD IYV+S E AY+NKTR NET +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

KAA0037956.1 glutamate receptor 2.8-like [Cucumis melo var. makuwa]1.75e-3578.65Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SNSNQVELDNVFYV  MKKNLVLVSQLT  GNF+VFGLDDVKVYH L+VSGT LMEGRR++SIY+IS E AY+NKTR N+T +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.57e-3783.15Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SNSNQVELDNVFYV GMKKNLV VSQLTSAGNFVVFG DDVKVYH L+VSGT LMEGRRMDSIYV+S E AY+NKTR N+T +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

TrEMBL top hitse value%identityAlignment
A0A5A7ST06 Integrase, catalytic core3.0e-2877.53Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SNSNQVELDNVFYVL MKKNLV VSQLTSA NF+VFG ++VKVYH L+VSGT LMEGRRMDSIYV+S E  YINK + NET +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

A0A5A7T1U9 Integrase, catalytic core2.9e-3182.02Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVPHSNSNQVELDNVFYV GMKKNLV VSQLTSA NFVVFGLDDVKVYH L+VSG+ LMEGRRMDSIYV+S + AY+NK R NET +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

A0A5A7T2J1 Integrase, catalytic core3.9e-2876.4Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SN NQVELDNVFYV GMKKNLV +SQLTS GNFVVFG +DVKVYH  +VSGT L+EGRRMD IYV+S E AY+NKTR NET +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

A0A5A7T6Z1 Glutamate receptor 2.8-like1.6e-2978.65Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SNSNQVELDNVFYV  MKKNLVLVSQLT  GNF+VFGLDDVKVYH L+VSGT LMEGRR++SIY+IS E AY+NKTR N+T +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

A0A5A7TYD2 Integrase, catalytic core1.7e-3183.15Show/hide
Query:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL
        MIVP SNSNQVELDNVFYV GMKKNLV VSQLTSAGNFVVFG DDVKVYH L+VSGT LMEGRRMDSIYV+S E AY+NKTR N+T +L
Subjt:  MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTTCCTCATTCTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGGAATGAAGAAAAATTTGGTGTTAGTATCTCAATTGACCTCAGCAGGTAA
CTTCGTCGTGTTTGGACTTGATGATGTCAAGGTGTATCATATTCTTGAAGTAAGTGGTACACTGTTGATGGAAGGACGAAGGATGGACTCCATTTACGTTATATCAACAG
AGCCTGCCTACATAAATAAGACACGAAACAATGAAACAAGAAATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGTTCCTCATTCTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGGAATGAAGAAAAATTTGGTGTTAGTATCTCAATTGACCTCAGCAGGTAA
CTTCGTCGTGTTTGGACTTGATGATGTCAAGGTGTATCATATTCTTGAAGTAAGTGGTACACTGTTGATGGAAGGACGAAGGATGGACTCCATTTACGTTATATCAACAG
AGCCTGCCTACATAAATAAGACACGAAACAATGAAACAAGAAATTTGTAG
Protein sequenceShow/hide protein sequence
MIVPHSNSNQVELDNVFYVLGMKKNLVLVSQLTSAGNFVVFGLDDVKVYHILEVSGTLLMEGRRMDSIYVISTEPAYINKTRNNETRNL