; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026270 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026270
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:3087556..3088764
RNA-Seq ExpressionIVF0026270
SyntenyIVF0026270
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037703.1 uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]2.85e-20677.11Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        M PDRLDLQRMEKKNVETFKEYAQRWRELA QVQPPLTDKELMAMFINTLRAPYYDR+VGSASTNFSDVITIGE IEFGVKNGRI DP+SEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSST++VVHVSSPTVGQ NYSY+YQNG                              E LPQLLKSHQVAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------
        H G+VGHSTENCFPLKAKVQSLVKAGWLKFKKTEEE DVN NPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------

Query:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCE KNEVQKLMDAKIL VGQ+S+Q+IEVDMIIDKETSNDTSIT+IS+NTISPNLLV Q PPKFELNNWEIKRTLKVSKGS
Subjt:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

KAA0055146.1 uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]6.16e-25089.3Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDR+VGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSSTQRVVHVSSP VGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------
        HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKK EEESDVN NPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------

Query:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKV+KGS
Subjt:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]1.34e-18176.5Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPP TDKEL AMFINTLRAPYYDR+VGSASTNFSDVITIGERIEFGVKN RISDPASE RR+M+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVV-HVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCE
        KE E+HELSSTQRV   VSSP VGQTN+S SYQNGG+SPF Q+TQRN RN+WKQT FDPIPMSYTELLPQL+KSHQVAIVPQEPL+PPYPKWYDPN KCE
Subjt:  KEEEIHELSSTQRVV-HVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCE

Query:  YHAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH------------------
        YHAG VGHSTENCFPLKAKVQSLVKAGWL+FKKT EE DVN NPLPNHEGP+IN VDTF +R+KNKV DV TSM TLFQILH                  
Subjt:  YHAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH------------------

Query:  --------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIID----KETSNDTS
                      DH I+DCCEFKNEVQKLMD+KIL +GQMSMQ+IEV+MI +    ++TSN+T+
Subjt:  --------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIID----KETSNDTS

KAA0063019.1 uncharacterized protein E6C27_scaffold468G001210 [Cucumis melo var. makuwa]4.77e-20677.86Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLR PYYDR+VGSASTNFSDVIT+GE+IEFGVKNGRISDPASEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNG                                         VAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------
        HAGVV HSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVN NP P HEGPAINIVDTFT+RYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------

Query:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVDMIIDKETSNDTS TVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
Subjt:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]2.77e-20777.11Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        M PDRLDLQRMEKKNVETFKEYAQRWRELA QVQPPLTDKELMAMFINTLRAPYYDR+VGSASTNFSDVITIGE IEFGVKNGRI DP+SEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSST++VVHVSSPTVGQ NYSY+YQNG                              E LPQLLKSHQVAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------
        H G+VGHSTENCFPLKAKVQSLVKAGWLKFKKTEEE DVN NPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------

Query:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCE KNEVQKLMDAKIL VGQ+S+Q+IEVDMIIDKETSNDTSIT+IS+NTISPNLLV Q PPKFELNNWEIKRTLKVSKGS
Subjt:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

TrEMBL top hitse value%identityAlignment
A0A1S4E534 uncharacterized protein LOC1035028381.2e-16677.11Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        M PDRLDLQRMEKKNVETFKEYAQRWRELA QVQPPLTDKELMAMFINTLRAPYYDR+VGSASTNFSDVITIGE IEFGVKNGRI DP+SEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSST++VVHVSSPTVGQ NYSY+YQNG                              E LPQLLKSHQVAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQIL--------------------
        H G+VGHSTENCFPLKAKVQSLVKAGWLKFKKTEEE DVN NPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQIL--------------------

Query:  ------------HDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCE KNEVQKLMDAKIL VGQ+S+Q+IEVDMIIDKETSNDTSIT+IS+NTISPNLLV Q PPKFELNNWEIKRTLKVSKGS
Subjt:  ------------HDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

A0A5A7SUT0 Reverse transcriptase8.6e-15477.05Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKEL AMFINTLRAPYYDR+VGSASTNFSDVITIGERIEFGVKNGRISDPASE RR+M+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRV-VHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCE
        KE E+HELSSTQRV   VSSP VGQTN+S SYQNGG+SPF Q+TQRN RN+WKQT FDPIPMSYTELLP L+KSHQVAIVPQEPL+PPYPKWYDPN KCE
Subjt:  KEEEIHELSSTQRV-VHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCE

Query:  YHAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH------------------
        YHAG VGHSTENCFPLKAKVQSLVKAGWL+FKKT EE DVN NPLPNHEGP+IN VDTF +R+KNKV DV TSM TLFQILH                  
Subjt:  YHAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH------------------

Query:  --------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMII----DKETSNDTS
                      DH I+DCCEFKNEVQKLMD+KIL +GQMSMQKIEV+MI     +++TSN+T+
Subjt:  --------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMII----DKETSNDTS

A0A5A7SUT0 Reverse transcriptase6.7e-0568.29Show/hide
Query:  ITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        I V+S+NT  P+ LV + PP FELNNWEIK+TLKV+KGSQK
Subjt:  ITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5A7T401 Retrotrans_gag domain-containing protein1.2e-16677.11Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        M PDRLDLQRMEKKNVETFKEYAQRWRELA QVQPPLTDKELMAMFINTLRAPYYDR+VGSASTNFSDVITIGE IEFGVKNGRI DP+SEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSST++VVHVSSPTVGQ NYSY+YQNG                              E LPQLLKSHQVAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQIL--------------------
        H G+VGHSTENCFPLKAKVQSLVKAGWLKFKKTEEE DVN NPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQIL--------------------

Query:  ------------HDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCE KNEVQKLMDAKIL VGQ+S+Q+IEVDMIIDKETSNDTSIT+IS+NTISPNLLV Q PPKFELNNWEIKRTLKVSKGS
Subjt:  ------------HDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

A0A5A7ULI2 Retrotrans_gag domain-containing protein2.7e-20089.3Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDR+VGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSSTQRVVHVSSP VGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------
        HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKK EEESDVN NPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------

Query:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKV+KGS
Subjt:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

A0A5A7VBN6 Retrotrans_gag domain-containing protein1.5e-16677.86Show/hide
Query:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK
        MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLR PYYDR+VGSASTNFSDVIT+GE+IEFGVKNGRISDPASEIRRMM+PKK
Subjt:  MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKK

Query:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY
        KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNG                                         VAIVPQEPL+PPYPKWYDPNVKCEY
Subjt:  KEEEIHELSSTQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEY

Query:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------
        HAGVV HSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVN NP P HEGPAINIVDTFT+RYKNKVCDVTTSMNTLFQIL                    
Subjt:  HAGVVGHSTENCFPLKAKVQSLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILH-------------------

Query:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
                     DHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVDMIIDKETSNDTS TVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS
Subjt:  -------------DHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGS

Query:  QK
        QK
Subjt:  QK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCCGATCGTCTGGATCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCT
GACCGACAAAGAATTGATGGCTATGTTCATAAACACTCTTCGGGCCCCATATTATGATAGAATTGTTGGAAGTGCTTCAACTAATTTCTCAGACGTCATAACCATTGGGG
AGAGGATTGAATTTGGAGTGAAGAATGGAAGGATCTCTGATCCCGCTTCAGAGATAAGAAGAATGATGTCCCCAAAGAAAAAAGAAGAAGAAATACATGAGTTGAGCTCG
ACTCAAAGAGTAGTGCATGTATCCTCACCAACTGTGGGGCAGACAAATTACTCCTATAGTTATCAGAATGGAGGTAAAAGCCCATTCAGTCAGGCAACTCAGAGAAATGC
AAGGAACAGTTGGAAGCAAACCTATTTTGATCCCATACCTATGTCATATACAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAGTGGCTATCGTACCACAAGAGCCGT
TGAAACCACCATATCCTAAGTGGTATGACCCCAACGTAAAATGTGAATATCATGCTGGGGTAGTTGGACATTCTACAGAGAACTGTTTTCCTTTGAAAGCTAAAGTGCAA
AGTCTAGTCAAGGCCGGATGGTTGAAATTCAAGAAGACAGAAGAAGAGTCTGACGTTAACCATAACCCTTTACCAAATCATGAGGGTCCCGCTATAAATATTGTTGACAC
ATTCACAGAAAGATACAAGAATAAGGTGTGTGATGTGACTACTTCAATGAATACACTTTTTCAAATCCTTCATGACCATTTTATTAAAGATTGTTGTGAGTTCAAGAATG
AGGTACAAAAGTTGATGGATGCAAAGATTCTCTGGGTAGGACAAATGAGCATGCAAAAAATCGAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATT
ACGGTTATCTCCAAGAATACTATTTCGCCTAATCTATTGGTTTCTCAGTTTCCACCAAAATTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGG
ATCACAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCCGATCGTCTGGATCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACAACGATGGAGAGAGTTAGCTGCACAAGTGCAACCTCCCCT
GACCGACAAAGAATTGATGGCTATGTTCATAAACACTCTTCGGGCCCCATATTATGATAGAATTGTTGGAAGTGCTTCAACTAATTTCTCAGACGTCATAACCATTGGGG
AGAGGATTGAATTTGGAGTGAAGAATGGAAGGATCTCTGATCCCGCTTCAGAGATAAGAAGAATGATGTCCCCAAAGAAAAAAGAAGAAGAAATACATGAGTTGAGCTCG
ACTCAAAGAGTAGTGCATGTATCCTCACCAACTGTGGGGCAGACAAATTACTCCTATAGTTATCAGAATGGAGGTAAAAGCCCATTCAGTCAGGCAACTCAGAGAAATGC
AAGGAACAGTTGGAAGCAAACCTATTTTGATCCCATACCTATGTCATATACAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAGTGGCTATCGTACCACAAGAGCCGT
TGAAACCACCATATCCTAAGTGGTATGACCCCAACGTAAAATGTGAATATCATGCTGGGGTAGTTGGACATTCTACAGAGAACTGTTTTCCTTTGAAAGCTAAAGTGCAA
AGTCTAGTCAAGGCCGGATGGTTGAAATTCAAGAAGACAGAAGAAGAGTCTGACGTTAACCATAACCCTTTACCAAATCATGAGGGTCCCGCTATAAATATTGTTGACAC
ATTCACAGAAAGATACAAGAATAAGGTGTGTGATGTGACTACTTCAATGAATACACTTTTTCAAATCCTTCATGACCATTTTATTAAAGATTGTTGTGAGTTCAAGAATG
AGGTACAAAAGTTGATGGATGCAAAGATTCTCTGGGTAGGACAAATGAGCATGCAAAAAATCGAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATT
ACGGTTATCTCCAAGAATACTATTTCGCCTAATCTATTGGTTTCTCAGTTTCCACCAAAATTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGG
ATCACAAAAGTAA
Protein sequenceShow/hide protein sequence
MAPDRLDLQRMEKKNVETFKEYAQRWRELAAQVQPPLTDKELMAMFINTLRAPYYDRIVGSASTNFSDVITIGERIEFGVKNGRISDPASEIRRMMSPKKKEEEIHELSS
TQRVVHVSSPTVGQTNYSYSYQNGGKSPFSQATQRNARNSWKQTYFDPIPMSYTELLPQLLKSHQVAIVPQEPLKPPYPKWYDPNVKCEYHAGVVGHSTENCFPLKAKVQ
SLVKAGWLKFKKTEEESDVNHNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILHDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSI
TVISKNTISPNLLVSQFPPKFELNNWEIKRTLKVSKGSQK