; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026274 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026274
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNase III domain-containing protein
Genome locationchr01:3140796..3149970
RNA-Seq ExpressionIVF0026274
SyntenyIVF0026274
Gene Ontology termsGO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR014720 - Double-stranded RNA-binding domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572281.1 Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]4.22e-14982.33Show/hide
Query:  MEGEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDT
        MEG   R      E   G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDT
Subjt:  MEGEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDT

Query:  EKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEM
        EKLARVAITHGFHRYLRHNKADL QKIEEF ++IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTELTEM
Subjt:  EKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEM

Query:  CQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        CQKRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      QFN+PC+PM
Subjt:  CQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

XP_004144598.1 ribonuclease 3-like protein 3 [Cucumis sativus]6.30e-17695.45Show/hide
Query:  EQRDGSRGG--EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
        E +DGSRGG  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
Subjt:  EQRDGSRGG--EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK

Query:  LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ
        LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN ID VWKIFKELMEPLITLKTMKKHPMTELTEMCQ
Subjt:  LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ

Query:  KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        KR+LKLEFRDRW+ETKEIEVLIEKQ+VGKGSYRKKLIAQNRAAKNAL+NLD FFPQFNQPC+PM
Subjt:  KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

XP_022969213.1 ribonuclease 3-like protein 3 [Cucurbita maxima]2.97e-14986.75Show/hide
Query:  GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR
        G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR
Subjt:  GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR

Query:  HNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQET
        HNKADL QKIEEF ++IEEYPLHSNGMIKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTELTEMCQKRNLK EF D W+E 
Subjt:  HNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQET

Query:  KEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      QFN+PC+PM
Subjt:  KEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

XP_023554575.1 ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]2.97e-14985.38Show/hide
Query:  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFH
        E   G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFH
Subjt:  EAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFH

Query:  RYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDR
        RYLRHNKADL QKIEEF ++IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTELTEMCQKRNLK EF D 
Subjt:  RYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDR

Query:  WQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      QFN+PC+PM
Subjt:  WQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

XP_038888348.1 ribonuclease 3-like protein 3 [Benincasa hispida]3.38e-15985.71Show/hide
Query:  MEGEEQR-------DGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
        ME EEQR         S GGEAVNG DS ASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL
Subjt:  MEGEEQR-------DGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRL

Query:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP
        RAANVDTEKLARVAITHGFHRYLRHNK DLH KIEEF +SIE+YPLHSNGMIKAPKVLADIVESTIGAVFADSNSI+ VWKIFK+LMEPLITLKTMKKHP
Subjt:  RAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHP

Query:  MTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        MTELTE+CQKRNL LEF D W+E KE++V I+KQLVGKGSYRKKLIAQNRAAK+AL+NLD    +FNQPC+PM
Subjt:  MTELTEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

TrEMBL top hitse value%identityAlignment
A0A0A0K1J8 RNase III domain-containing protein1.4e-13795.45Show/hide
Query:  EQRDGSR--GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
        E +DGSR  GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
Subjt:  EQRDGSR--GGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK

Query:  LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ
        LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN ID VWKIFKELMEPLITLKTMKKHPMTELTEMCQ
Subjt:  LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ

Query:  KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        KR+LKLEFRDRW+ETKEIEVLIEKQ+VGKGSYRKKLIAQNRAAKNAL+NLD FFPQFNQPC+PM
Subjt:  KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

A0A1Q3BNT8 Ribonuclease_3 domain-containing protein (Fragment)4.2e-7866.23Show/hide
Query:  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL
        L+G+E IL Y+F +K LLEEAFT ASY SP+ C+S+ERLE+VGDSVLN L T+EQYF  PNL PG LTRLRAANVDTEKLARV+I HG HRYL H K  L
Subjt:  LDGIEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL

Query:  HQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEV
         Q+I+EF ++I +YPLHSNG++  PKVLADIVESTIGAVF DSN SIDIVWK+FK L+EP+I+++T+K+HP+TEL E+CQK+NLK++F D W+E+   EV
Subjt:  HQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEIEV

Query:  LIEKQLVGKGSY-RKKLIAQNRAAKNALDNL
         I+ QLVG+ +Y  KK IA NRAAK+AL+N+
Subjt:  LIEKQLVGKGSY-RKKLIAQNRAAKNALDNL

A0A6J1C375 ribonuclease 3-like protein 33.1e-11382.26Show/hide
Query:  SDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        S+SP SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
Subjt:  SDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETK
        NK+DL +KIEEF   ++EYPLHSNG+IKAPK+LADIVESTIGAVF DSNS+D VW IF+ LMEPLITLKT+K+HPMTELTE+CQKRNLKLEF D W++TK
Subjt:  NKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETK

Query:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        E++V I+KQLVGKGSYRKKLIAQNRAAK+AL+NLD    Q NQPC+PM
Subjt:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

A0A6J1GKQ4 ribonuclease 3-like protein 31.1e-11582.2Show/hide
Query:  GEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK
        G+  +   RGGE+     + ASLDG+EAIL YEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEK
Subjt:  GEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEK

Query:  LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ
        LARVAITHGFHRYLRHNKADL QKIEEF ++IEEYPLHSNG+IKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTELTEMCQ
Subjt:  LARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQ

Query:  KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        KRNLK EF D W+E KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      QFN+PC+PM
Subjt:  KRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

A0A6J1I0C1 ribonuclease 3-like protein 32.7e-11786.75Show/hide
Query:  GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR
        G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR
Subjt:  GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR

Query:  HNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQET
        HNKADL QKIEEF ++IEEYPLHSNGMIKAPK+LADIVES IGAVF DSNSID VW IFK LMEPLITLKTMK+HPMTELTEMCQKRNLK EF D W+E 
Subjt:  HNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQET

Query:  KEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM
        KEI VLI+KQLVGKGSY KKLIAQNRAAK+ALDN      QFN+PC+PM
Subjt:  KEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM

SwissProt top hitse value%identityAlignment
Q69KJ0 Ribonuclease 3-like protein 32.5e-5950.63Show/hide
Query:  PASLDGIEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        P  +  +E++L YEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE + +   L PG LTRLRAANVD EKLARVA+ HG H +LRH 
Subjt:  PASLDGIEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQK--RNLKLEFRDRWQE
          +L  +I +F   +  YP+HSNG++  PKVL D+VES IGA++ DSN + +IVW++F++L +PLI+L+T+ KHP++EL E CQK  R +K+  +D W +
Subjt:  KADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQK--RNLKLEFRDRWQE

Query:  TKEIEVLIEKQLVGKGSY-RKKLIAQNRAAKNALDNL
           +EVLI+ ++VG+ +Y +KK IAQNRAAK ALD L
Subjt:  TKEIEVLIEKQLVGKGSY-RKKLIAQNRAAKNALDNL

Q6ATG6 Ribonuclease 3-like protein 29.8e-4040.43Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKI
        +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP L PG L+ LRAAN+ TEKLARVA+ H  +  LR N   L   +
Subjt:  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKI

Query:  EEFGRSIEEYP-------LHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQE--T
         +F  ++++ P        +   ++KAPKVLADIVE+   AV+ D    ++ +WK+ + L EP+IT +T+ + P+T L E+CQK     +F+  WQ+   
Subjt:  EEFGRSIEEYP-------LHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQE--T

Query:  KEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNL
          + V +  +LVG GS  +K+IA+  AA++A   L
Subjt:  KEIEVLIEKQLVGKGSYRKKLIAQNRAAKNALDNL

Q8LMR2 Endoribonuclease Dicer homolog 12.3e-4141.88Show/hide
Query:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL
        + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H +LRH  + L
Subjt:  SLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADL

Query:  HQKIEEFGRSIEEYPLHSN------GMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQ
          +I EF + ++E  L         G  KAPKVL DIVES  GA+F DS     +VWK+F+ L+ P++T +T+  HP+ EL E CQ++   LE++  R  
Subjt:  HQKIEEFGRSIEEYPLHSN------GMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQ

Query:  ETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL
            +EV ++   +G     +K +AQ  AA+NAL
Subjt:  ETKEIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL

Q9LTQ0 Ribonuclease 3-like protein 24.4e-4038.04Show/hide
Query:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT
        S    +V  S    S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P+L P  L+ LRAANV TEKLARV++ 
Subjt:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT

Query:  HGFHRYLRHNKADLHQKIEEFGRSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK
        HG + +LR N   L +K++EF  ++   ++  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++TL  ++K   P++ L ++C K
Subjt:  HGFHRYLRHNKADLHQKIEEFGRSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK

Query:  RNLKLEFRDRWQETKEIEVL-IEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFP
           +++ ++       I V+ ++ +L+  G    K IA+  AAK AL  L   FP
Subjt:  RNLKLEFRDRWQETKEIEVL-IEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFP

Q9SP32 Endoribonuclease Dicer homolog 11.2e-4243.72Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGRSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQETK
        I EF + ++       +     G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E CQ++   LE++  R   T 
Subjt:  IEEFGRSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQETK

Query:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL
         +EV I+   VG     +K +AQ  AA+NAL
Subjt:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 18.8e-4443.72Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGRSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQETK
        I EF + ++       +     G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E CQ++   LE++  R   T 
Subjt:  IEEFGRSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQETK

Query:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL
         +EV I+   VG     +K +AQ  AA+NAL
Subjt:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL

AT1G01040.2 dicer-like 18.8e-4443.72Show/hide
Query:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        G+E  L YEF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH  + L ++
Subjt:  GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGRSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQETK
        I EF + ++       +     G  KAPKVL DIVES  GA+F DS       WK+F+ L++P++T +T+  HP+ EL E CQ++   LE++  R   T 
Subjt:  IEEFGRSIEE------YPLHSNGMIKAPKVLADIVESTIGAVFADS-NSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFR-DRWQETK

Query:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL
         +EV I+   VG     +K +AQ  AA+NAL
Subjt:  EIEVLIEKQLVGKGSYRKKLIAQNRAAKNAL

AT3G03300.1 dicer-like 25.9e-3237.92Show/hide
Query:  IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK
        +E++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LSPG LT +R+A+V+ E  A VA+    H+++ +    LH+ 
Subjt:  IEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQK

Query:  IEEFGRSIEEYPLHS----NGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKL----EFRDRWQET
        I       E+  L S       I  PKVL D++ES  GA+F DS  + ++V+   K L+  +IT +T+K HP+ ELTE+CQK   +L    +F     E 
Subjt:  IEEFGRSIEEYPLHS----NGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKL----EFRDRWQET

Query:  KEIEVLI-------EKQLVGKGSYRKKLIAQNRAAKNALD
        K  E+         +K++  K +Y++ L       KN+LD
Subjt:  KEIEVLI-------EKQLVGKGSYRKKLIAQNRAAKNALD

AT3G20420.1 RNAse THREE-like protein 23.1e-4138.04Show/hide
Query:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT
        S    +V  S    S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y + P+L P  L+ LRAANV TEKLARV++ 
Subjt:  SRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAIT

Query:  HGFHRYLRHNKADLHQKIEEFGRSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK
        HG + +LR N   L +K++EF  ++   ++  +   G++KAPKVLAD+ ES  GAV+ D N  +  +W IF+ L+EP++TL  ++K   P++ L ++C K
Subjt:  HGFHRYLRHNKADLHQKIEEFGRSI---EEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDIVWKIFKELMEPLITLKTMKK--HPMTELTEMCQK

Query:  RNLKLEFRDRWQETKEIEVL-IEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFP
           +++ ++       I V+ ++ +L+  G    K IA+  AAK AL  L   FP
Subjt:  RNLKLEFRDRWQETKEIEVL-IEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFP

AT4G15417.1 RNAse II-like 19.7e-6752.31Show/hide
Query:  GSRGGEAVNGSDSPAS-----------LDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAAN
        GS+   A++G D+  +           ++ +E ILNY+F+DK LL +AFTDASY  +   S+E LE +GDS+LN  I  +     P  +PG LT+LRA N
Subjt:  GSRGGEAVNGSDSPAS-----------LDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAAN

Query:  VDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTEL
        VDTEKLARVA+ H  + YLRH K  L ++I EF  ++E+YPLHSNG++K PKVLADIVESTIGA+F D NS + VWK+ K L+EP+I L  MK HPMTEL
Subjt:  VDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTEL

Query:  TEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYR-KKLIAQNRAAKNALDNLDAFF
         EMCQKRNLKL  +D W+E +     IE + VG G +  KK  A+N AAKNA+DN   FF
Subjt:  TEMCQKRNLKLEFRDRWQETKEIEVLIEKQLVGKGSYR-KKLIAQNRAAKNALDNLDAFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGAAGAACAGAGAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGCTATTTTGAACTACGAGTTTCG
AGACAAGAGATTACTGGAAGAGGCTTTTACGGACGCTTCCTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAGATTCGGTGTTGAATTTTCTGA
TAACGAGAGAACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGCCTCCGAGCTGCGAATGTGGACACGGAAAAACTTGCTCGAGTAGCTATTACTCAT
GGATTTCATCGGTATCTTCGCCACAACAAAGCCGATCTTCATCAAAAAATAGAAGAGTTCGGTAGAAGTATAGAGGAATATCCATTACATTCTAATGGAATGATAAAAGC
CCCAAAAGTCCTAGCCGACATTGTTGAATCAACCATTGGAGCTGTTTTCGCCGATAGCAACTCCATTGACATTGTTTGGAAGATATTTAAGGAATTAATGGAGCCATTGA
TAACATTGAAGACAATGAAGAAACATCCAATGACGGAATTGACAGAAATGTGTCAAAAGAGAAACCTGAAGTTGGAGTTTAGAGATCGTTGGCAGGAAACAAAAGAAATA
GAAGTTTTGATTGAGAAACAACTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATCGCACAAAATAGAGCTGCTAAAAATGCTTTGGACAACTTAGACGCATTCTTTCC
ACAATTTAATCAACCTTGTCGACCTATGTAA
mRNA sequenceShow/hide mRNA sequence
GTTTGATAGAGATTTGATAGAGCAATAGAGGAAGAGAAAGAAATCCCCACAGCCAACAAAATAAAATTAAGTTTTGGTTTGAGAATCCCCGAAATCCCGGCATGGAAGGA
GAAGAACAGAGAGACGGAAGCAGAGGCGGAGAGGCGGTCAACGGCAGCGATTCACCGGCGAGTTTGGACGGAATCGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAG
ATTACTGGAAGAGGCTTTTACGGACGCTTCCTACTCACCGGAAAATTGCTCGTCGTTCGAACGATTAGAATACGTCGGAGATTCGGTGTTGAATTTTCTGATAACGAGAG
AACAATACTTCTCGAATCCAAATCTGTCGCCGGGTTCGTTGACTCGCCTCCGAGCTGCGAATGTGGACACGGAAAAACTTGCTCGAGTAGCTATTACTCATGGATTTCAT
CGGTATCTTCGCCACAACAAAGCCGATCTTCATCAAAAAATAGAAGAGTTCGGTAGAAGTATAGAGGAATATCCATTACATTCTAATGGAATGATAAAAGCCCCAAAAGT
CCTAGCCGACATTGTTGAATCAACCATTGGAGCTGTTTTCGCCGATAGCAACTCCATTGACATTGTTTGGAAGATATTTAAGGAATTAATGGAGCCATTGATAACATTGA
AGACAATGAAGAAACATCCAATGACGGAATTGACAGAAATGTGTCAAAAGAGAAACCTGAAGTTGGAGTTTAGAGATCGTTGGCAGGAAACAAAAGAAATAGAAGTTTTG
ATTGAGAAACAACTTGTTGGTAAAGGAAGTTATCGCAAAAAGCTTATCGCACAAAATAGAGCTGCTAAAAATGCTTTGGACAACTTAGACGCATTCTTTCCACAATTTAA
TCAACCTTGTCGACCTATGTAA
Protein sequenceShow/hide protein sequence
MEGEEQRDGSRGGEAVNGSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITH
GFHRYLRHNKADLHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNSIDIVWKIFKELMEPLITLKTMKKHPMTELTEMCQKRNLKLEFRDRWQETKEI
EVLIEKQLVGKGSYRKKLIAQNRAAKNALDNLDAFFPQFNQPCRPM