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IVF0026286 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026286
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr08:18337554..18337718
RNA-Seq ExpressionIVF0026286
SyntenyIVF0026286
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]1.39e-1279.25Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        M K KEVEANIATIEKE + GSSSKT+VG SQIKKKGK KTPK  KGKKV KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

KAA0063913.1 gag/pol protein [Cucumis melo var. makuwa]3.82e-1481.13Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        MDKRKEVE N+A IEKEFM  SSSKTKVG SQIKKK KRKTPK  KGKKV KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

KAA0063982.1 gag/pol protein [Cucumis melo var. makuwa]3.94e-1477.36Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        MDK KEVEA +AT++KEF +GSSSKTKVG  Q+KKKGK KTPKKIKGKKV+KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

TYK16050.1 gag/pol protein [Cucumis melo var. makuwa]3.50e-1273.58Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        M K KEVEAN+AT EKEFM+G SSKTKVG SQ+KKKGK KTPK  KGKK  +G
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

TYK30527.1 gag/pol protein [Cucumis melo var. makuwa]2.45e-1278.43Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVV
        M K KEVEAN+ATIEKEFM GS SKTKVG SQ+KKKGK KTPK  KGKK+V
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVV

TrEMBL top hitse value%identityAlignment
A0A5A7T0L9 Gag/pol protein3.2e-0979.25Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        M K KEVEANIATIEKE + GSSSKT+VG SQIKKKGK KTPK  KGKKV KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

A0A5A7V6N3 Gag/pol protein2.2e-1077.36Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        MDK KEVEA +AT++KEF +GSSSKTKVG  Q+KKKGK KTPKKIKGKKV+KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

A0A5D3CM82 Gag/pol protein5.0e-1081.13Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        MDKRKEVE N+A IEKEFM  SSSKTKVG SQIKKK KRKTPK  KGKKV KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

A0A5D3E1U5 Gag/pol protein1.2e-0877.36Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG
        M K KEVEANIAT EKE + GSSSKT+VG SQIKKKGK KTPK  KGKKV KG
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKG

A0A5D3E379 Gag/pol protein4.2e-0978.43Show/hide
Query:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVV
        M K KEVEAN+ATIEKEFM GS SKTKVG SQ+KKKGK KTPK  KGKK+V
Subjt:  MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGAGGAAGGAAGTGGAAGCAAATATTGCTACCATTGAAAAAGAGTTTATGAAAGGATCGTCCTCTAAAACTAAAGTTGGATTTTCACAAATAAAGAAGAAGGG
AAAGAGGAAGACTCCCAAGAAAATTAAGGGAAAGAAAGTTGTGAAAGGTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGAGGAAGGAAGTGGAAGCAAATATTGCTACCATTGAAAAAGAGTTTATGAAAGGATCGTCCTCTAAAACTAAAGTTGGATTTTCACAAATAAAGAAGAAGGG
AAAGAGGAAGACTCCCAAGAAAATTAAGGGAAAGAAAGTTGTGAAAGGTATATGA
Protein sequenceShow/hide protein sequence
MDKRKEVEANIATIEKEFMKGSSSKTKVGFSQIKKKGKRKTPKKIKGKKVVKGI