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IVF0026306 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026306
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr03:16497161..16497385
RNA-Seq ExpressionIVF0026306
SyntenyIVF0026306
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025107.1 uncharacterized protein E6C27_scaffold124G00010 [Cucumis melo var. makuwa]1.53e-3389.19Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG +GAGRGQPEEQPAVP  DPNAPVT+ADLAAMEQRYQDMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

KAA0046148.1 gag protease polyprotein [Cucumis melo var. makuwa]1.36e-3187.84Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG RGAGRGQPE QPA P  DPNAPVT+ADLAAMEQRYQDMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

KAA0051053.1 histone H2B.3-like [Cucumis melo var. makuwa]4.71e-3289.19Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARR GGRG RGAGRGQPE QPA PT DPNAPVTQADLAAMEQRYQDMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

KAA0053205.1 histone H2B.3-like [Cucumis melo var. makuwa]2.55e-3289.19Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG RGA RGQPEEQPA P  DPNAPVTQADLAAMEQRYQDMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

TYK26963.1 uncharacterized protein E5676_scaffold322G00250 [Cucumis melo var. makuwa]5.78e-41100Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

TrEMBL top hitse value%identityAlignment
A0A5A7SK22 Uncharacterized protein5.8e-2589.19Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG +GAGRGQPEEQPAVP  DPNAPVT+ADLAAMEQRYQDMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

A0A5A7VB64 Gag protease polyprotein1.7e-2489.19Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG RGAGRGQPE QPA P  DPNAPVTQADLAAMEQRYQDMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

A0A5A7VL51 Reverse transcriptase7.5e-2590.54Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG RGAGRGQPEEQPAVP  DPNAPVTQADLAAMEQRY DMLQAALA F AAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

A0A5D3DTK4 Uncharacterized protein2.7e-30100Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

A0A5D3DZG7 Reverse transcriptase3.4e-2589.19Show/hide
Query:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA
        MPP RGARRGGGRG RG GRGQPEEQPAVPT DPNAP+TQADLAAMEQRYQDMLQAALA F AAQQN+AAPVQA
Subjt:  MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCACATAGAGGTGCACGCCGAGGAGGTGGTAGAGGAGACAGAGGAGCCGGTCGTGGCCAGCCGGAGGAGCAACCTGCTGTGCCGACGGCCGACCCTAACGCACC
CGTCACCCAGGCGGATCTCGCCGCAATGGAGCAGCGTTATCAGGACATGCTGCAAGCTGCTCTAGCGTCTTTCCATGCTGCCCAGCAGAACCAGGCCGCCCCTGTTCAGG
CCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCACATAGAGGTGCACGCCGAGGAGGTGGTAGAGGAGACAGAGGAGCCGGTCGTGGCCAGCCGGAGGAGCAACCTGCTGTGCCGACGGCCGACCCTAACGCACC
CGTCACCCAGGCGGATCTCGCCGCAATGGAGCAGCGTTATCAGGACATGCTGCAAGCTGCTCTAGCGTCTTTCCATGCTGCCCAGCAGAACCAGGCCGCCCCTGTTCAGG
CCTAG
Protein sequenceShow/hide protein sequence
MPPHRGARRGGGRGDRGAGRGQPEEQPAVPTADPNAPVTQADLAAMEQRYQDMLQAALASFHAAQQNQAAPVQA