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IVF0026362 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026362
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr09:15140851..15141123
RNA-Seq ExpressionIVF0026362
SyntenyIVF0026362
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035915.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]5.71e-2368.6Show/hide
Query:  MSSRVSIASPPSFMSRRFPSCPSTVQQRRRRAFINHRSSRESKPGSANASRVVLHKPNHLNRHLLTSRVNSKLSASRASQPIFIPS
        MSS+VS+ASPPSF      S P  VQQR RRA IN +SSRESKP SAN S+VVL KPNH + HLL SR NSKL ASR SQ IFIPS
Subjt:  MSSRVSIASPPSFMSRRFPSCPSTVQQRRRRAFINHRSSRESKPGSANASRVVLHKPNHLNRHLLTSRVNSKLSASRASQPIFIPS
TrEMBL top hitse value%identityAlignment
A0A5A7T374 Retrovirus-related Pol polyprotein from transposon 17.63.4e-1968.6Show/hide
Query:  MSSRVSIASPPSFMSRRFPSCPSTVQQRRRRAFINHRSSRESKPGSANASRVVLHKPNHLNRHLLTSRVNSKLSASRASQPIFIPS
        MSS+VS+ASPPSF      S P  VQQR RRA IN +SSRESKP SAN S+VVL KPNH + HLL SR NSKL ASR SQ IFIPS
Subjt:  MSSRVSIASPPSFMSRRFPSCPSTVQQRRRRAFINHRSSRESKPGSANASRVVLHKPNHLNRHLLTSRVNSKLSASRASQPIFIPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCCGAGTCTCCATCGCGTCTCCTCCTTCGTTCATGTCTCGTCGTTTTCCGTCGTGTCCTTCAACTGTGCAGCAGCGTCGTCGACGAGCCTTCATCAATCATCG
ATCATCGCGTGAGTCTAAGCCAGGTTCAGCAAACGCAAGCCGAGTCGTTCTTCACAAACCAAACCACCTGAATCGTCACCTCCTCACAAGTCGCGTGAACTCCAAGCTGT
CTGCAAGCCGCGCATCCCAGCCGATCTTCATTCCGAGTCGTATCCTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCCGAGTCTCCATCGCGTCTCCTCCTTCGTTCATGTCTCGTCGTTTTCCGTCGTGTCCTTCAACTGTGCAGCAGCGTCGTCGACGAGCCTTCATCAATCATCG
ATCATCGCGTGAGTCTAAGCCAGGTTCAGCAAACGCAAGCCGAGTCGTTCTTCACAAACCAAACCACCTGAATCGTCACCTCCTCACAAGTCGCGTGAACTCCAAGCTGT
CTGCAAGCCGCGCATCCCAGCCGATCTTCATTCCGAGTCGTATCCTTGTGTAA
Protein sequenceShow/hide protein sequence
MSSRVSIASPPSFMSRRFPSCPSTVQQRRRRAFINHRSSRESKPGSANASRVVLHKPNHLNRHLLTSRVNSKLSASRASQPIFIPSRILV