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IVF0026369 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026369
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein L5 (Mitochondrion)
Genome locationchr12:4466324..4466632
RNA-Seq ExpressionIVF0026369
SyntenyIVF0026369
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059489.1 ribosomal protein L5 [Cucumis melo var. makuwa]5.61e-6397Show/hide
Query:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWYVS
        MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMP + S
Subjt:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWYVS

KAA0061317.1 hypothetical protein E6C27_scaffold6213G00130 [Cucumis melo var. makuwa]4.30e-2160.98Show/hide
Query:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        MPRTQFS  R K          +V VISLSIF AR   TS HT GML H F+QGIGRE SSLEG+LW +PK  KRWPML T+
Subjt:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.32e-2668.29Show/hide
Query:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        MPR+QFS    KS +PTVSSLC V VI+LSIF AR   TS HT GML   FS+GIG+E SSLEG+LWCNPK SKRW MLPT+
Subjt:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]9.45e-2670.83Show/hide
Query:  VKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        VKSG PTVSS+CSV VI LSIFGA    TS HTPGML   FS GI RE  SLEG+LWC+PK S+RWPMLPT+
Subjt:  VKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

TYK23424.1 gag/pol protein [Cucumis melo var. makuwa]1.72e-1960.49Show/hide
Query:  PRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        P+ QFSH  VKSG PTVSSL  + +I L +FGA   + S HTP ML HT S GIGRE SSLE +LWC+PK SK W ML T+
Subjt:  PRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

TrEMBL top hitse value%identityAlignment
A0A5A7V129 Ribosomal protein L5 (Mitochondrion)6.7e-4897Show/hide
Query:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWYVS
        MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMP + S
Subjt:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWYVS

A0A5A7V368 Uncharacterized protein3.9e-1660.98Show/hide
Query:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        MPRTQFS  R K          +V VISLSIF AR   TS HT GML H F+QGIGRE SSLEG+LW +PK  KRWPML T+
Subjt:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.1e-2168.29Show/hide
Query:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        MPR+QFS    KS +PTVSSLC V VI+LSIF AR   TS HT GML   FS+GIG+E SSLEG+LWCNPK SKRW MLPT+
Subjt:  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

A0A5D3CZ27 ULP_PROTEASE domain-containing protein2.2e-1970.83Show/hide
Query:  VKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        VKSG PTVSS+CSV VI LSIFGA    TS HTPGML   FS GI RE  SLEG+LWC+PK S+RWPMLPT+
Subjt:  VKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

A0A5D3DIF8 Gag/pol protein1.1e-1560.49Show/hide
Query:  PRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA
        P+ QFSH  VKSG PTVSSL  + +I L +FGA   + S HTP ML HT S GIGRE SSLE +LWC+PK SK W ML T+
Subjt:  PRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCGGACTCAGTTTTCTCATCCTAGGGTAAAAAGCGGTTCTCCGACGGTTTCTTCCCTTTGCTCCGTATTCGTCATAAGTCTTTCAATCTTTGGGGCTCGTGCTTC
GAGCACTTCAGTCCACACTCCTGGCATGCTCCTTCACACGTTTTCCCAAGGTATAGGTCGAGAAGAGAGCTCGTTGGAGGGACAACTGTGGTGCAACCCAAAAGGGTCCA
AAAGATGGCCAATGCTTCCAACGGCACAACCTAATGATGCATCTAATACCACTGTGCCTAGAATGCCTTGGTATGTCTCTGCTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCGGACTCAGTTTTCTCATCCTAGGGTAAAAAGCGGTTCTCCGACGGTTTCTTCCCTTTGCTCCGTATTCGTCATAAGTCTTTCAATCTTTGGGGCTCGTGCTTC
GAGCACTTCAGTCCACACTCCTGGCATGCTCCTTCACACGTTTTCCCAAGGTATAGGTCGAGAAGAGAGCTCGTTGGAGGGACAACTGTGGTGCAACCCAAAAGGGTCCA
AAAGATGGCCAATGCTTCCAACGGCACAACCTAATGATGCATCTAATACCACTGTGCCTAGAATGCCTTGGTATGTCTCTGCTCCTTAA
Protein sequenceShow/hide protein sequence
MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWYVSAP