CuGenDBv2

Gene ID	IVF0026397
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag protease polyprotein
Genome location	chr11:23956947..23957162
RNA-Seq Expression	IVF0026397
Synteny	IVF0026397
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034778.1 gag protease polyprotein [Cucumis melo var. makuwa]

6.42e-31

93.85

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRDMIMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

KAA0040379.1 gag protease polyprotein [Cucumis melo var. makuwa]

4.66e-30

89.23

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVA APDP AP+THA LAAMEQRFRD+IMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

KAA0055895.1 gag protease polyprotein [Cucumis melo var. makuwa]

9.98e-31

90.77

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRG+GAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRD+IMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

KAA0062895.1 gag protease polyprotein [Cucumis melo var. makuwa]

5.74e-30

90.77

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGA RVQPEVQPVAQAPDP APVTHA LAAMEQRFRD+IMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

TYK22524.1 gag protease polyprotein [Cucumis melo var. makuwa]

2.61e-30

92.31

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRD+IMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SVV6 Gag protease polyprotein

3.0e-23

93.85

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRDMIMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

A0A5A7T3M7 Gag protease polyprotein

3.0e-23

93.85

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRDMIMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

A0A5A7UI54 Gag protease polyprotein

3.0e-23

93.85

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRDMIMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

A0A5A7UJE2 Gag protease polyprotein

1.8e-23

93.85

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHA LAAMEQRFRD+IMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

A0A5D3BPI1 Reverse transcriptase

3.0e-23

93.85

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Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP APVTHA LAAMEQRFRDMIMQMREQQ  A
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCACCAAGGAGAGGTGCACGTAGGGGTGGTCGAGGAGGCCGTGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGACTGC
GCCAGTTACTCATGCGGGCCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGCCTGTTGCAGGAGAGGGCCAACTCGTCTAA

mRNA sequence

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Protein sequence

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MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPTAPVTHAGLAAMEQRFRDMIMQMREQQPVAGEGQLV

IVF0026397 (gene) of Melon (IVF77) v1 genome