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IVF0026424 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026424
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein ATL66
Genome locationchr04:7918854..7919075
RNA-Seq ExpressionIVF0026424
SyntenyIVF0026424
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33917.1 hypothetical protein [Cucumis melo subsp. melo]4.51e-1352.78Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEI
        M ++ G S +G+ +S+  KRKR G+ IE+A II+NA EYANDQL  I +WP +R+Q+AS T  + VRQLQ I
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEI

KAA0036810.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]5.67e-44100Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
        MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP

KAA0052025.1 retrotransposon protein [Cucumis melo var. makuwa]3.90e-1449.32Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
        MGT+    SEG+  S+G KRKRGGQA +   ++R A +Y N+QL  IAEWP ++HQ+ + T  + VRQL+ IP
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]5.80e-2061.64Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
        MGT+P  S+EG+T S+G KRK+GGQA+E  EIIRN  E++ND+LK I EW NV+ Q+ASA  V+ VRQLQ IP
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP

TYK11924.1 retrotransposon protein [Cucumis melo var. makuwa]1.70e-1557.75Show/hide
Query:  GTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEI
        GT+ G ++E +   +  K+K+GGQ+IE  EIIRN  EYANDQLK IAEWPNV+ Q+AS T  + VRQLQ I
Subjt:  GTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEI

TrEMBL top hitse value%identityAlignment
A0A5A7T0C2 RING-H2 finger protein ATL663.7e-32100Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
        MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP

A0A5A7UK94 Uncharacterized protein1.1e-0953.62Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQL
        MGTQP  SS+GK +S+  KRKRGG   E   IIRN  E+ANDQLK I EWPNV+ Q    +  + V+ L
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQL

A0A5A7V469 Retrotransposon protein1.2e-1461.64Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
        MGT+P  S+EG+T S+G KRK+GGQA+E  EIIRN  E++ND+LK I EW NV+ Q+ASA  V+ VRQLQ IP
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP

A0A5D3BZD6 Retrotransposon protein6.7e-1049.32Show/hide
Query:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP
        MGT+    SEG+  S+G KRKRGGQA +   ++R A +Y N+QL  IAEWP ++HQ+ + T  + VRQL+ IP
Subjt:  MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP

A0A5D3CL79 Retrotransposon protein2.1e-1157.75Show/hide
Query:  GTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEI
        GT+ G ++E +   +  K+K+GGQ+IE  EIIRN  EYANDQLK IAEWPNV+ Q+AS T  + VRQLQ I
Subjt:  GTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTACACAGCCTGGTTGCTCAAGTGAGGGTAAGACTAGTTCAAATGGGTTGAAGAGGAAGCGGGGAGGCCAGGCAATAGAAATGGCAGAAATCATTCGAAATGCAAG
GGAATATGCGAATGACCAGCTAAAGACCATTGCAGAATGGCCAAATGTACGCCACCAAGAAGCAAGCGCAACACATGTGAAGGACGTTAGACAATTGCAGGAAATCCCTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGGTACACAGCCTGGTTGCTCAAGTGAGGGTAAGACTAGTTCAAATGGGTTGAAGAGGAAGCGGGGAGGCCAGGCAATAGAAATGGCAGAAATCATTCGAAATGCAAG
GGAATATGCGAATGACCAGCTAAAGACCATTGCAGAATGGCCAAATGTACGCCACCAAGAAGCAAGCGCAACACATGTGAAGGACGTTAGACAATTGCAGGAAATCCCTT
AA
Protein sequenceShow/hide protein sequence
MGTQPGCSSEGKTSSNGLKRKRGGQAIEMAEIIRNAREYANDQLKTIAEWPNVRHQEASATHVKDVRQLQEIP