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IVF0026428 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026428
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:25610663..25611535
RNA-Seq ExpressionIVF0026428
SyntenyIVF0026428
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040709.1 hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa]4.51e-8957.71Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+ LIEVRLKIRHNY   I AQINI ++K NIFTVQT+S+TEGRWFKERNANIHGSFTRQAAL+FNEFDFEA++YSFM F ATPP+K++KKPKK+ K+
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
        S+NSN+RP+ISNSLDSTSKAIII +NSDGGR SD RLK VIS                                               AK LRIES  F
Subjt:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF

Query:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLGTYHLSQKKWK
        KD+S   DRT  PLKIS  K T + +K KSP+MIYRVKNN+NK I L+AK++++ EKKE   NL VDLG   ++++ +K
Subjt:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLGTYHLSQKKWK

KAA0047508.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]1.06e-5187Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+DLIEVRLKIRHNY  FIPAQINI +SKGNIFT+QTVSFTE RWFKERNANIH  FTRQAALEFNEFDFEAEKYSFMGFV TPP+KKDKK KK+LKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

KAA0062230.1 hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa]1.16e-3237.55Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+DLIE RLKI+HNY  FI AQINI NSKGNIFT+ TVS+TEGRW                                                     
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
                                        +DGRLKFVISG+MDKGKGIMVF + Q+E   ANF KRK                              
Subjt:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF

Query:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
                  +KPLKI+  K T  QKK+KSPR IYRVKNN+NK IEL     ++ EKKE AINL ++LG
Subjt:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG

KAA0063733.1 hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa]8.39e-183100Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
        SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
Subjt:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF

Query:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
        KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
Subjt:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG

TYK07346.1 hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]2.42e-8961.4Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKK--DKKPKKSL
        MRK+DLIEVR KIRHNY  FIPAQI I +SKGNIFTVQTVSFTEGR FKERNANIHGSFTRQAALEFNEFDF+AEKY FMGFVATPPEKK  +KK KK+ 
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKK--DKKPKKSL

Query:  KHSQNSNKRPTISNSLDSTSKAIIIF-NNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIES
        KHS+NSNKRPTISNS DSTSKAIII  NN D GR +DGRLK +I+ +MDK  GIMVFT++ DEIQ A+FPKRKV                          
Subjt:  KHSQNSNKRPTISNSLDSTSKAIIIF-NNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIES

Query:  LIFKDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
                                            IYRVKNNNNK IEL+A+ L +TEKKE AINLAVDLG
Subjt:  LIFKDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG

TrEMBL top hitse value%identityAlignment
A0A5A7THF9 Uncharacterized protein2.9e-7257.71Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+ LIEVRLKIRHNY   I AQINI ++K NIFTVQT+S+TEGRWFKERNANIHGSFTRQAAL+FNEFDFEA++YSFM F ATPP+K++KKPKK+ K+
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
        S+NSN+RP+ISNSLDSTSKAIII +NSDGGR SD RLK VIS                                               AK LRIES  F
Subjt:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF

Query:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLGTYHLSQKKWK
        KD+S   DRT  PLKIS  K T + +K KSP+MIYRVKNN+NK I L+AK++++ EKKE   NL VDLG   ++++ +K
Subjt:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLGTYHLSQKKWK

A0A5A7V4L2 Uncharacterized protein7.5e-2837.55Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+DLIE RLKI+HNY  FI AQINI NSKGNIFT+ TVS+TEGRW                                                     
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
                                        +DGRLKFVISG+MDKGKGIMVF + Q+E   ANF KRK                              
Subjt:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF

Query:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
                  +KPLKI+  K T  QKK+KSPR IYRVKNN+NK I     EL++ EKKE AINL ++LG
Subjt:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG

A0A5A7V6K4 Uncharacterized protein1.4e-143100Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
        SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF
Subjt:  SQNSNKRPTISNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIF

Query:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
        KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
Subjt:  KDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG

A0A5D3CAI5 Uncharacterized protein6.5e-7261.4Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE--KKDKKPKKSL
        MRK+DLIEVR KIRHNY  FIPAQI I +SKGNIFTVQTVSFTEGR FKERNANIHGSFTRQAALEFNEFDF+AEKY FMGFVATPPE  KK+KK KK+ 
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE--KKDKKPKKSL

Query:  KHSQNSNKRPTISNSLDSTSKAIIIF-NNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIES
        KHS+NSNKRPTISNS DSTSKAIII  NN D GR +DGRLK +I+ +MDK  GIMVFT++ DEIQ A+FPKRKV                          
Subjt:  KHSQNSNKRPTISNSLDSTSKAIIIF-NNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIES

Query:  LIFKDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG
                                            IYRVKNNNNK IEL+A+ L +TEKKE AINLAVDLG
Subjt:  LIFKDSSPSYDRTLKPLKISLPKSTLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLG

A0A5D3DT94 Putative amidohydrolase ytcJ1.3e-4087Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+DLIEVRLKIRHNY  FIPAQINI +SKGNIFT+QTVSFTE RWFKERNANIH  FTRQAALEFNEFDFEAEKYSFMGFV TPP+KKDKK KK+LKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAATCAGATCTTATTGAAGTCAGACTGAAGATCAGACACAACTACATAAGCTTCATACCAGCACAAATTAACATTATGAATAGTAAAGGTAACATTTTCACAGT
CCAAACAGTTTCTTTCACTGAAGGAAGATGGTTCAAAGAAAGAAATGCAAACATACACGGATCTTTCACTAGACAAGCCGCTTTGGAATTTAATGAATTTGATTTTGAGG
CTGAAAAATACTCTTTCATGGGTTTTGTTGCCACACCACCAGAGAAGAAAGATAAGAAGCCAAAGAAATCTCTCAAACACAGCCAGAACAGTAACAAACGTCCGACCATT
TCAAATTCTCTAGACTCTACATCAAAGGCCATCATTATTTTTAACAACTCTGACGGAGGTAGAAGTAGTGATGGAAGACTTAAGTTTGTCATATCAGGAAGGATGGACAA
AGGGAAAGGCATAATGGTATTTACAAACCAGCAAGATGAGATACAGACAGCAAATTTTCCAAAGAGAAAAGTGAGCTTTCCCTCTCCAAAAAACAAGACTTTTTTCTACA
ATCCTAAAATAGCCCCAGCGAAAACACTTCGTATTGAAAGCCTAATTTTCAAAGATAGCTCACCAAGCTATGACAGAACACTAAAGCCTCTAAAAATCAGCCTACCAAAA
TCTACCCTCCTTCAGAAGAAAAGGAAAAGTCCTCGGATGATATACAGAGTTAAAAATAACAACAACAAGGTTATTGAACTAAATGCTAAAGAATTGATAGACACAGAGAA
GAAGGAGATGGCCATTAACTTGGCAGTGGATTTGGGAACATATCACCTCTCTCAGAAGAAATGGAAGTTAAGCATGTCTCAAGCCCGAACTCTCCAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAATCAGATCTTATTGAAGTCAGACTGAAGATCAGACACAACTACATAAGCTTCATACCAGCACAAATTAACATTATGAATAGTAAAGGTAACATTTTCACAGT
CCAAACAGTTTCTTTCACTGAAGGAAGATGGTTCAAAGAAAGAAATGCAAACATACACGGATCTTTCACTAGACAAGCCGCTTTGGAATTTAATGAATTTGATTTTGAGG
CTGAAAAATACTCTTTCATGGGTTTTGTTGCCACACCACCAGAGAAGAAAGATAAGAAGCCAAAGAAATCTCTCAAACACAGCCAGAACAGTAACAAACGTCCGACCATT
TCAAATTCTCTAGACTCTACATCAAAGGCCATCATTATTTTTAACAACTCTGACGGAGGTAGAAGTAGTGATGGAAGACTTAAGTTTGTCATATCAGGAAGGATGGACAA
AGGGAAAGGCATAATGGTATTTACAAACCAGCAAGATGAGATACAGACAGCAAATTTTCCAAAGAGAAAAGTGAGCTTTCCCTCTCCAAAAAACAAGACTTTTTTCTACA
ATCCTAAAATAGCCCCAGCGAAAACACTTCGTATTGAAAGCCTAATTTTCAAAGATAGCTCACCAAGCTATGACAGAACACTAAAGCCTCTAAAAATCAGCCTACCAAAA
TCTACCCTCCTTCAGAAGAAAAGGAAAAGTCCTCGGATGATATACAGAGTTAAAAATAACAACAACAAGGTTATTGAACTAAATGCTAAAGAATTGATAGACACAGAGAA
GAAGGAGATGGCCATTAACTTGGCAGTGGATTTGGGAACATATCACCTCTCTCAGAAGAAATGGAAGTTAAGCATGTCTCAAGCCCGAACTCTCCAATTATGA
Protein sequenceShow/hide protein sequence
MRKSDLIEVRLKIRHNYISFIPAQINIMNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKHSQNSNKRPTI
SNSLDSTSKAIIIFNNSDGGRSSDGRLKFVISGRMDKGKGIMVFTNQQDEIQTANFPKRKVSFPSPKNKTFFYNPKIAPAKTLRIESLIFKDSSPSYDRTLKPLKISLPK
STLLQKKRKSPRMIYRVKNNNNKVIELNAKELIDTEKKEMAINLAVDLGTYHLSQKKWKLSMSQARTLQL