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IVF0026430 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026430
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:19371588..19371878
RNA-Seq ExpressionIVF0026430
SyntenyIVF0026430
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048380.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.11e-5489.58Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL  VRHL+ILSDRNQPREDGLSL VE PWAGAFADHWPRLDNNS+L RLSVEIPL EGKSAWVLQSSIHNEA NS RALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.09e-5390.62Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL GVRHL+ILSDRNQPREDGLSL VEKPWAGAFADHWPRLDNNS+L RLSVEIPL EGKSAW+LQSSIHNEA NS RALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.85e-5689.58Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL GVRHL+ILSDRNQPREDGLSL VEKPWAGAFADHWPRLDNNS+L RLSVE+PL EGKSAWVLQSSIHNEA NS +ALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

KAA0061876.1 hypothetical protein E6C27_scaffold89G001190 [Cucumis melo var. makuwa]4.84e-5696.88Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQ+L+ G
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

XP_008442010.1 PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo]4.38e-5283.33Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        M+YFTERFLFGVRHL++  DRNQ REDGLSL VEKPW G+FADHWPRLDN+SIL RLSVEIPLFEGK+AWVLQSSIHNE  NSDR LTLGQ LIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein2.7e-4390.62Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL GVRHL+ILSDRNQPREDGLSL VEKPWAGAFADHWPRLDNNS+L RLSVE+PL EGKSAWVLQSSIHNEA NS RALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

A0A5A7UET3 Putative mitochondrial protein2.7e-4390.62Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL GVRHL+ILSDRNQPREDGLSL VEKPWAGAFADHWPRLDNNS+L RLSVEIPL EGKSAW+LQSSIHNEA NS RALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

A0A5A7UR46 Putative mitochondrial protein4.7e-4389.58Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL GVRHL+ILSDRNQPREDGLSL VEKPWAGAFADHWPRLDNNS+L RLSVE+PL EGKSAWVLQSSIHNEA NS +ALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

A0A5D3C3D7 PMD domain-containing protein4.2e-4491.67Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFL GVRHL+ILSDRNQPREDGLSL VEKPWAGAFADHWPRLDNNS+LLRLSVE+PL EGKSAWVLQSSIHNEA NS RALTLGQRLIEG
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

A0A5D3CVJ1 Uncharacterized protein3.1e-4796.88Show/hide
Query:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG
        MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQ+L+ G
Subjt:  MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTTACAGAACGATTCTTGTTCGGAGTTCGACACCTCATAATACTTTCCGATAGAAATCAACCCAGAGAAGATGGACTTAGTCTCTTTGTGGAAAAGCCATG
GGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAATTCTTCTCAGATTATCCGTGGAGATACCTTTGTTTGAGGGAAAAAGTGCATGGGTCTTGCAAT
CTTCTATCCATAACGAGGCTCTTAATTCTGACAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTTACAGAACGATTCTTGTTCGGAGTTCGACACCTCATAATACTTTCCGATAGAAATCAACCCAGAGAAGATGGACTTAGTCTCTTTGTGGAAAAGCCATG
GGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAATTCTTCTCAGATTATCCGTGGAGATACCTTTGTTTGAGGGAAAAAGTGCATGGGTCTTGCAAT
CTTCTATCCATAACGAGGCTCTTAATTCTGACAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCTAA
Protein sequenceShow/hide protein sequence
MVYFTERFLFGVRHLIILSDRNQPREDGLSLFVEKPWAGAFADHWPRLDNNSILLRLSVEIPLFEGKSAWVLQSSIHNEALNSDRALTLGQRLIEG