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IVF0026433 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026433
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon gag protein
Genome locationchr06:3877988..3878482
RNA-Seq ExpressionIVF0026433
SyntenyIVF0026433
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025375.1 zinc finger Y-chromosomal protein 1-like isoform X1 [Cucumis melo var. makuwa]7.89e-7576.83Show/hide
Query:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA
        ML  RRSS QI  +++D  LKY+ A+KV+VSY+LQPRMSSSQI YRR G PLKYVAA+KIVVLKYV AEKI+VSNMLQPRRSS +ICCSQKDFCLKYIVA
Subjt:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA

Query:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        EKVVVSYILQPRMSSSQIC  R GR   YVAAEKIVVLKYV AEKI+ SNMLQ +R  SQ+ CS
Subjt:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

KAA0032450.1 hypothetical protein E6C27_scaffold999G00100 [Cucumis melo var. makuwa]1.91e-7679.27Show/hide
Query:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA
        ML  +RSSSQ+Y +RE  RL+YV  +K IVSY+LQPRMSSSQI   REGRPLKYVA +KI VLKYV AEKIIVSNMLQPRRSSSQICCSQKDFC +YI+A
Subjt:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA

Query:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        EKVVVSYILQPRMSSSQIC  RE R   YVAAEKI VLKYVAAEKII SNMLQ RR SSQICCS
Subjt:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

KAA0039100.1 zinc finger Y-chromosomal protein 1-like isoform X1 [Cucumis melo var. makuwa]6.54e-105100Show/hide
Query:  RRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVV
        RRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVV
Subjt:  RRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVV

Query:  VSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        VSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
Subjt:  VSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

KAA0046208.1 hypothetical protein E6C27_scaffold8039G00010 [Cucumis melo var. makuwa]2.46e-7075.14Show/hide
Query:  RRSSSQIYYNREDRRLKYVAAKKVIV-SYMLQ---PRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA
        R SSSQI   R  R LKYVAA+K++V  Y+     PRMSSSQI  RREG PLKYVAA+KIVVLKYV AEKIIVSNMLQPRRSSSQICCSQKDF LKYIVA
Subjt:  RRSSSQIYYNREDRRLKYVAAKKVIV-SYMLQ---PRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA

Query:  E---------KVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        E         KVVVSYILQPRMS SQICCCR G    YVAAEKIVVLKYVAAEKI+ SNMLQ RR SSQICCS
Subjt:  E---------KVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

KAA0065301.1 hypothetical protein E6C27_scaffold1023G00170 [Cucumis melo var. makuwa]8.91e-9993.87Show/hide
Query:  LWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAE
        L QRRSS QIYYNREDRRLKYVAAKKV+VSYMLQPRMSSSQIYYRREGRPLKYVA QKI VLKYVEAEK IVSNMLQPRRSSSQICCSQKDFCLKYIVAE
Subjt:  LWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAE

Query:  KVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        KVVVSYILQPRMSSSQICCCREGR F YVAAEKIVVLKYVAAEKIIASNMLQ RR SSQICCS
Subjt:  KVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

TrEMBL top hitse value%identityAlignment
A0A5A7SLN4 Zinc finger Y-chromosomal protein 1-like isoform X11.1e-5776.83Show/hide
Query:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA
        ML  RRSS QI  +++D  LKY+ A+KV+VSY+LQPRMSSSQI YRR G PLKYVAA+KIVVLKYV AEKI+VSNMLQPRRSS +ICCSQKDFCLKYIVA
Subjt:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA

Query:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        EKVVVSYILQPRMSSSQIC  R GR   YVAAEKIVVLKYV AEKI+ SNMLQ +R  SQ+ CS
Subjt:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

A0A5A7SNS6 Uncharacterized protein2.7e-5979.27Show/hide
Query:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA
        ML  +RSSSQ+Y +RE  RL+YV  +K IVSY+LQPRMSSSQI   REGRPLKYVA +KI VLKYV AEKIIVSNMLQPRRSSSQICCSQKDFC +YI+A
Subjt:  MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVA

Query:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        EKVVVSYILQPRMSSSQIC  RE R   YVAAEKI VLKYVAAEKII SNMLQ RR SSQICCS
Subjt:  EKVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

A0A5A7T770 Zinc finger Y-chromosomal protein 1-like isoform X14.8e-80100Show/hide
Query:  RRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVV
        RRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVV
Subjt:  RRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVV

Query:  VSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        VSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
Subjt:  VSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

A0A5A7VHT0 Uncharacterized protein1.2e-7593.87Show/hide
Query:  LWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAE
        L QRRSS QIYYNREDRRLKYVAAKKV+VSYMLQPRMSSSQIYYRREGRPLKYVA QKI VLKYVEAEK IVSNMLQPRRSSSQICCSQKDFCLKYIVAE
Subjt:  LWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAE

Query:  KVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        KVVVSYILQPRMSSSQICCCREGR F YVAAEKIVVLKYVAAEKIIASNMLQ RR SSQICCS
Subjt:  KVVVSYILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

A0A5D3C2C8 Retrotransposon gag protein5.3e-5577.22Show/hide
Query:  SSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVVVS
        SSSQI  +++D RLKY+ A+ V+VS MLQPRMSSS+I Y RE       + +KI VLKYV AEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVVVS
Subjt:  SSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVVVS

Query:  YILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS
        YILQPRMSSSQICC REGR   YVA EKI+VLKYVAAEKII SNMLQ RR SSQICCS
Subjt:  YILQPRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTGGCAGAGAAGATCATCGTCTCAAATATATTACAACCGAGAAGATCGTCGTCTCAAATACGTTGCAGCCAAAAAGGTCATCGTCTCATATATGTTGCAGCCGAG
GATGTCGTCGTCTCAAATATATTATCGTCGAGAAGGTCGTCCCCTAAAATATGTTGCAGCTCAGAAGATTGTCGTTCTTAAATATGTTGAAGCAGAAAAGATAATCGTCT
CAAATATGTTACAACCGAGAAGATCGTCGTCTCAAATATGTTGCAGCCAAAAAGATTTTTGTCTCAAGTATATTGTAGCCGAGAAAGTCGTCGTCTCATATATATTGCAG
CCGAGGATGTCGTCGTCTCAAATATGTTGCTGTCGAGAAGGTCGTTCCTTCAATTATGTTGCAGCTGAGAAGATTGTCGTTCTTAAATATGTTGCAGCTGAGAAGATCAT
CGCCTCAAATATGTTACAACTGAGAAGATTGTCGTCTCAAATATGTTGCAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTGGCAGAGAAGATCATCGTCTCAAATATATTACAACCGAGAAGATCGTCGTCTCAAATACGTTGCAGCCAAAAAGGTCATCGTCTCATATATGTTGCAGCCGAG
GATGTCGTCGTCTCAAATATATTATCGTCGAGAAGGTCGTCCCCTAAAATATGTTGCAGCTCAGAAGATTGTCGTTCTTAAATATGTTGAAGCAGAAAAGATAATCGTCT
CAAATATGTTACAACCGAGAAGATCGTCGTCTCAAATATGTTGCAGCCAAAAAGATTTTTGTCTCAAGTATATTGTAGCCGAGAAAGTCGTCGTCTCATATATATTGCAG
CCGAGGATGTCGTCGTCTCAAATATGTTGCTGTCGAGAAGGTCGTTCCTTCAATTATGTTGCAGCTGAGAAGATTGTCGTTCTTAAATATGTTGCAGCTGAGAAGATCAT
CGCCTCAAATATGTTACAACTGAGAAGATTGTCGTCTCAAATATGTTGCAGCTAA
Protein sequenceShow/hide protein sequence
MLWQRRSSSQIYYNREDRRLKYVAAKKVIVSYMLQPRMSSSQIYYRREGRPLKYVAAQKIVVLKYVEAEKIIVSNMLQPRRSSSQICCSQKDFCLKYIVAEKVVVSYILQ
PRMSSSQICCCREGRSFNYVAAEKIVVLKYVAAEKIIASNMLQLRRLSSQICCS