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IVF0026435 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026435
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr11:8818421..8818618
RNA-Seq ExpressionIVF0026435
SyntenyIVF0026435
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032527.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.11e-2094.34Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVK
        MADITAEAVMVEMERKINLL+KVVEERVHEITTLREHMRTRET+E SQTSVVK
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVK

KAA0041105.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.85e-2076.92Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        MADITA+A MVEMERKIN LMKVVEER HEIT LRE +RTRET ESSQT +VK +DK K +VQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.42e-2080Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        MADITAEA M EMERKIN LMKVVEER HEIT LRE MRTRET ESSQT VVK +DK K +VQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

TYJ98339.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.63e-2098.08Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVV
        MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSV+
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVV

TYK03673.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.57e-2181.54Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        MADIT EA MVEMERKINLL+KV+EER HEIT LRE MRTRET ESSQT VVK SDK K+MVQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

TrEMBL top hitse value%identityAlignment
A0A5A7TYE9 Ty3-gypsy retrotransposon protein3.6e-1580Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        MADITAEA M EMERKIN LMKVVEER HEIT LRE MRTRET ESSQT VVK +DK K +VQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

A0A5A7UG56 Ty3-gypsy retrotransposon protein1.6e-1580Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        MADITAEA MVEMERKIN LMK VEER HEIT LRE MRTRET+ESSQT VVK +DK K +VQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

A0A5A7VCU1 Ty3-gypsy retrotransposon protein9.6e-1681.54Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        M DITAEAVM EMERKIN LMKVVEER HEIT LRE M+TRETVESSQTSVVK +DK K +VQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

A0A5D3BH24 Ty3-gypsy retrotransposon protein1.2e-1596.23Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVK
        MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSV++
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVK

A0A5D3BVE2 Ty3-gypsy retrotransposon protein9.6e-1681.54Show/hide
Query:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN
        MADIT EA MVEMERKINLL+KV+EER HEIT LRE MRTRET ESSQT VVK SDK K+MVQEN
Subjt:  MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATATAACAGCTGAGGCTGTGATGGTGGAGATGGAGAGGAAAATTAACCTCCTCATGAAGGTTGTGGAGGAACGAGTCCACGAAATCACAACTTTGAGAGAGCA
TATGCGGACTCGTGAAACTGTTGAGTCGAGTCAAACTTCTGTTGTCAAAATTAGTGATAAAAGGAAGACTATGGTGCAAGAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATATAACAGCTGAGGCTGTGATGGTGGAGATGGAGAGGAAAATTAACCTCCTCATGAAGGTTGTGGAGGAACGAGTCCACGAAATCACAACTTTGAGAGAGCA
TATGCGGACTCGTGAAACTGTTGAGTCGAGTCAAACTTCTGTTGTCAAAATTAGTGATAAAAGGAAGACTATGGTGCAAGAAAATTAA
Protein sequenceShow/hide protein sequence
MADITAEAVMVEMERKINLLMKVVEERVHEITTLREHMRTRETVESSQTSVVKISDKRKTMVQEN