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IVF0026473 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026473
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr03:12182396..12183209
RNA-Seq ExpressionIVF0026473
SyntenyIVF0026473
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035974.1 hypothetical protein E6C27_scaffold56G001830 [Cucumis melo var. makuwa]2.80e-1972.58Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATLE
        ELSV EYKKKF +L KYA+ LI SETKRC R V+ L GKIRTPVVP  VR DYA+LVDATL 
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATLE

KAA0051216.1 hypothetical protein E6C27_scaffold1250G00170 [Cucumis melo var. makuwa]6.42e-1668.85Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        ELSV EY+KKF +LVKYA+VLI SETKRC   +N L G+IRTPVVPIAVR  Y +LV A L
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

KAA0062421.1 hypothetical protein E6C27_scaffold154G002300 [Cucumis melo var. makuwa]8.29e-1362.3Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        ELSVAEYK KF +L KYA+ LI  E +RC + V  L GKIRT VVPI +R DYA LVD  L
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

KGN47273.1 hypothetical protein Csa_017002 [Cucumis sativus]1.36e-1760.94Show/hide
Query:  MARELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        MARELSVA+Y+KKF +L KYA+VL+  ET+RC + VN L G+ R P+V I VR DYA+LVDA +
Subjt:  MARELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

TYK18871.1 hypothetical protein E5676_scaffold204G00730 [Cucumis melo var. makuwa]1.67e-1667.74Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATLE
        ELSV EY+KKF +LVKYA+VLI SETKRC   +N L G+IRTPVVPIAVR  Y +LV A L 
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATLE

TrEMBL top hitse value%identityAlignment
A0A0A0KCJ9 Uncharacterized protein1.9e-1160.94Show/hide
Query:  MARELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        MARELSVA+Y+KKF +L KYA+VL+  ET+RC + VN L G+ R P+V I VR DYA+LVDA +
Subjt:  MARELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

A0A5A7UAJ2 Uncharacterized protein4.2e-1168.85Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        ELSV EY+KKF +LVKYA+VLI SETKRC   +N L G+IRTPVVPIAVR  Y +LV A L
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

A0A5D3D5N9 Uncharacterized protein3.2e-1168.85Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        ELSV EY+KKF +LVKYA+VLI SETKRC   +N L G+IRTPVVPIAVR  Y +LV A L
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

A0A5D3DS44 Uncharacterized protein1.9e-0862.3Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        ELSVAEY KKF +L KYA+ LI  E +RC + V  L GKIRT VVPI +R DYA LVD  L
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

A0A5D3E3Q3 Retrotrans_gag domain-containing protein8.9e-1473.77Show/hide
Query:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL
        ELSV EYKKKF +L KYA+ LI SETKRC R V+ L GKIRTPVVP  VR DYA+LVDATL
Subjt:  ELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAGAACTCTCTGTTGCCGAATATAAGAAGAAGTTTGCGAAATTGGTCAAGTATGCAATTGTCCTAATCACCTCGGAGACCAAAAGATGTTGGCGATTAGTGAA
CAAATTATGTGGAAAAATCAGAACTCCCGTTGTGCCAATCGCGGTGAGATGTGATTATGCAAAGCTGGTAGACGCAACTCTAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAGAACTCTCTGTTGCCGAATATAAGAAGAAGTTTGCGAAATTGGTCAAGTATGCAATTGTCCTAATCACCTCGGAGACCAAAAGATGTTGGCGATTAGTGAA
CAAATTATGTGGAAAAATCAGAACTCCCGTTGTGCCAATCGCGGTGAGATGTGATTATGCAAAGCTGGTAGACGCAACTCTAGAGTAG
Protein sequenceShow/hide protein sequence
MARELSVAEYKKKFAKLVKYAIVLITSETKRCWRLVNKLCGKIRTPVVPIAVRCDYAKLVDATLE