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IVF0026479 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026479
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:6727766..6727939
RNA-Seq ExpressionIVF0026479
SyntenyIVF0026479
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0019222 - regulation of metabolic process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038274.1 retrotransposon protein [Cucumis melo var. makuwa]1.05e-1063.16Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
        MAAQVIE +EAIL+L +   S C+++VNQKVSLM SF +M D +K AYCRILL  DS
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
KAA0043024.1 ACT11D09.5 [Cucumis melo var. makuwa]5.26e-1160.71Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
        MA ++IEHME+I SL I   SKCIMIV +KVSLM +F +M DP+K AYCR+L   D
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
KAA0050379.1 retrotransposon protein [Cucumis melo var. makuwa]2.59e-27100Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
        MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
KAA0053375.1 retrotransposon protein [Cucumis melo var. makuwa]1.18e-0967.35Show/hide
Query:  IEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLS
        I+HMEAI SL +   SKCIM+VNQKVSLM SF +M DP+K  YCRIL S
Subjt:  IEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLS
TYK28753.1 retrotransposon protein [Cucumis melo var. makuwa]1.62e-0958.93Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
        M AQVIE+M++I SL +   SKC++IV +KVSLM +F +M DP+KVAYCR+LL  D
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
TrEMBL top hitse value%identityAlignment
A0A5A7T479 Retrotransposon protein1.1e-0763.16Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
        MAAQVIE +EAIL+L +   S C+++VNQKVSLM SF +M D +K AYCRILL  DS
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
A0A5A7TI58 ACT11D09.51.1e-0760.71Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
        MA ++IEHME+I SL I   SKCIMIV +KVSLM +F +M DP+K AYCR+L   D
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
A0A5A7TWZ4 Retrotransposon protein7.1e-0758.93Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
        M AQVIE+M++I SL +   SKC++IV +KVSLM +F +M DP+KVAYCR+LL  D
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
A0A5A7UA62 Retrotransposon protein3.3e-20100Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
        MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS
A0A5D3DYD1 Retrotransposon protein7.1e-0758.93Show/hide
Query:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
        M AQVIE+M++I SL +   SKC++IV +KVSLM +F +M DP+KVAYCR+LL  D
Subjt:  MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGCAGGTGATTGAGCATATGGAGGCCATCTTGAGCCTTATTATAATGGCGGGGAGTAAGTGCATCATGATAGTGAATCAAAAGGTGTCACTCATGATAAGCTT
CACCCAGATGTTCGATCCGGTGAAGGTCGCTTACTGTAGGATCCTCCTTAGCGATGACTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGCAGGTGATTGAGCATATGGAGGCCATCTTGAGCCTTATTATAATGGCGGGGAGTAAGTGCATCATGATAGTGAATCAAAAGGTGTCACTCATGATAAGCTT
CACCCAGATGTTCGATCCGGTGAAGGTCGCTTACTGTAGGATCCTCCTTAGCGATGACTCGTGA
Protein sequenceShow/hide protein sequence
MAAQVIEHMEAILSLIIMAGSKCIMIVNQKVSLMISFTQMFDPVKVAYCRILLSDDS