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IVF0026483 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026483
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr09:12855341..12855547
RNA-Seq ExpressionIVF0026483
SyntenyIVF0026483
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051577.1 uncharacterized protein E6C27_scaffold174G001170 [Cucumis melo var. makuwa]5.03e-1876Show/hide
Query:  HAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        + KELENFIFD +QY  ASGTNS+E KVTLA  HLSDDAKLWWRSKVN+ 
Subjt:  HAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

KAA0056239.1 uncharacterized protein E6C27_scaffold226G00030 [Cucumis melo var. makuwa]5.04e-1977.55Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AKE ENFIFDMEQY  ASGTN E+ KVTLA  HLSDDAKLWWRS+VN++
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

KAA0062358.1 uncharacterized protein E6C27_scaffold154G001250 [Cucumis melo var. makuwa]1.69e-39100Show/hide
Query:  MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
Subjt:  MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

TYK19296.1 uncharacterized protein E5676_scaffold295G00130 [Cucumis melo var. makuwa]8.54e-1881.63Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AKELE FI +MEQY  ASGTNSEE KVTLAS HLSDDAKLWWRSKVN++
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

WP_217833205.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.41e-1983.67Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AK+LENFIFDM+QY  ASGT SEE KVTLAS HLSDDAKLWWRSKVN+V
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

TrEMBL top hitse value%identityAlignment
A0A5A7URV8 Uncharacterized protein3.6e-1377.55Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AKE ENFIFDMEQY  ASGTN E+ KVTLA  HLSDDAKLWWRS+VN++
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

A0A5A7UYE8 Gag/pol protein1.6e-1381.63Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AKELE FI +MEQY  ASGTNSEE KVTLAS HLSDDAKLWWRSKVN++
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

A0A5D3D6V5 Retrotrans_gag domain-containing protein1.6e-1381.63Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AKELE FI +MEQY  ASGTNSEE KVTLAS HLSDDAKLWWRSKVN++
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

A0A5D3DTL1 Uncharacterized protein4.6e-29100Show/hide
Query:  MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
Subjt:  MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

A0A6J1D906 Reverse transcriptase6.1e-1373.47Show/hide
Query:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV
        AK+LENF+FD+EQY  A+GT SEE KVTLA+ HL+DDAKLWWRSKVN++
Subjt:  AKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGATGAAAGTGCAAGTGAATTTAACTATGCTATTGGGAATTGCAATGCATGCTAAAGAGCTTGAAAATTTCATCTTTGACATGGAACAGTACATTAATGCCAG
TGGAACCAACTCTGAAGAAGCTAAGGTGACACTAGCCTCCAGGCATTTGTCTGATGATGCAAAACTCTGGTGGAGGTCGAAAGTGAACAACGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGATGAAAGTGCAAGTGAATTTAACTATGCTATTGGGAATTGCAATGCATGCTAAAGAGCTTGAAAATTTCATCTTTGACATGGAACAGTACATTAATGCCAG
TGGAACCAACTCTGAAGAAGCTAAGGTGACACTAGCCTCCAGGCATTTGTCTGATGATGCAAAACTCTGGTGGAGGTCGAAAGTGAACAACGTATAA
Protein sequenceShow/hide protein sequence
MAEMKVQVNLTMLLGIAMHAKELENFIFDMEQYINASGTNSEEAKVTLASRHLSDDAKLWWRSKVNNV