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IVF0026500 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026500
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:16351490..16351846
RNA-Seq ExpressionIVF0026500
SyntenyIVF0026500
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0044249 - cellular biosynthetic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0016740 - transferase activity (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036991.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.37e-1642.34Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS
        M KK EERFEA++QE+S ++ +LQKLPAVEEKLS++                   A++KN+++LS +++ QQQQ+Q++MKY++  V EK   T D EG S
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS

Query:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD
        S+ K        G A   E  EE+K   K EE+KT++
Subjt:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD

KAA0039162.1 hypothetical protein E6C27_scaffold121G00640 [Cucumis melo var. makuwa]8.81e-67100Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILE
        MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILE
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILE

Query:  LTEESKTSKKKEEEKTSD
        LTEESKTSKKKEEEKTSD
Subjt:  LTEESKTSKKKEEEKTSD

KAA0054161.1 uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa]4.14e-2152.59Show/hide
Query:  KKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILELT
        K+ EE+ EA DQ+IS IR EL KLP +EE LSS A  K+IE+L IQ+EKQQQQ QLL+KYIEG+VKEK  +    EGSSS+ +  E+ +   +A + +  
Subjt:  KKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILELT

Query:  EESKTSKKKEEEKTSD
         E K SK +EEE  +D
Subjt:  EESKTSKKKEEEKTSD

KAE8650833.1 hypothetical protein Csa_017505, partial [Cucumis sativus]8.34e-2048.15Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLA-------------------MVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS
        M KK +E FEA+++EI  I+ +LQK+PA+EE LS+L                    ++KN++QL+ Q +KQQQQHQLLMKYIE +VKEK   T D++GSS
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLA-------------------MVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS

Query:  SRTKTSEN
        S+ KT E+
Subjt:  SRTKTSEN

TYK17139.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]2.46e-1743.07Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS
        M KK EERFEA++QE+S ++ +LQKLPAVEEKLS++                   A++KN++QLS ++E QQQ++Q++MKY++ +V EK   T D EGSS
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS

Query:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD
        S+ K        G A   E  EE+K   K EE+K ++
Subjt:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD

TrEMBL top hitse value%identityAlignment
A0A5A7T5W7 Ty3-gypsy retrotransposon protein1.6e-1342.34Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS
        M KK EERFEA++QE+S ++ +LQKLPAVEEKLS++                   A++KN+++LS +++ QQQQ+Q++MKY++  V EK   T D EG S
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS

Query:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD
        S+ K        G A   E  EE+K   K EE+KT++
Subjt:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD

A0A5A7T6Q0 Uncharacterized protein3.7e-50100Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILE
        MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILE
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILE

Query:  LTEESKTSKKKEEEKTSD
        LTEESKTSKKKEEEKTSD
Subjt:  LTEESKTSKKKEEEKTSD

A0A5A7UKU8 Uncharacterized protein3.0e-1552.59Show/hide
Query:  KKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILELT
        K+ EE+ EA DQ+IS IR EL KLP +EE LSS A  K+IE+L IQ+EKQQQQ QLL+KYIEG+VKEK  +    EGSSS+ +  E+ +   +A + +  
Subjt:  KKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILELT

Query:  EESKTSKKKEEEKTSD
         E K SK +EEE  +D
Subjt:  EESKTSKKKEEEKTSD

A0A5D3BLG2 Transposon Tf2-1 polyprotein isoform X16.8e-1238.69Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS
        M KK EERFEA++QE+S ++ +L KLPAVE+KLS++                   A++KN+++LS +++ QQQQ+Q++MKY++ +V EK   + D EGSS
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS

Query:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD
        S+ K    +V+ G+    + T+E+K   K E+ K ++
Subjt:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD

A0A5D3D379 Putative retroelement pol polyprotein3.3e-1443.07Show/hide
Query:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS
        M KK EERFEA++QE+S ++ +LQKLPAVEEKLS++                   A++KN++QLS ++E QQQ++Q++MKY++ +V EK   T D EGSS
Subjt:  MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSL-------------------AMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSS

Query:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD
        S+ K        G A   E  EE+K   K EE+K ++
Subjt:  SRTKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGAAGAAAGAAGAAAGGTTCGAGGCAATAGATCAAGAAATCTCTGGCATCCGAGCAGAACTTCAGAAACTACCAGCGGTCGAGGAGAAGTTATCTTCACTGGC
AATGGTAAAGAATATTGAGCAATTAAGTATTCAAAGCGAGAAACAACAGCAGCAACACCAATTATTGATGAAGTACATCGAAGGCATTGTCAAAGAGAAATTTGTGATAA
CACTTGATACCGAAGGTTCATCAAGTAGAACAAAGACGAGTGAGAATAAGGTGGTAGAAGGTGAAGCAATGATACTCGAACTCACTGAAGAGTCGAAAACTAGTAAGAAG
AAAGAAGAGGAAAAGACGAGTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGAAGAAAGAAGAAAGGTTCGAGGCAATAGATCAAGAAATCTCTGGCATCCGAGCAGAACTTCAGAAACTACCAGCGGTCGAGGAGAAGTTATCTTCACTGGC
AATGGTAAAGAATATTGAGCAATTAAGTATTCAAAGCGAGAAACAACAGCAGCAACACCAATTATTGATGAAGTACATCGAAGGCATTGTCAAAGAGAAATTTGTGATAA
CACTTGATACCGAAGGTTCATCAAGTAGAACAAAGACGAGTGAGAATAAGGTGGTAGAAGGTGAAGCAATGATACTCGAACTCACTGAAGAGTCGAAAACTAGTAAGAAG
AAAGAAGAGGAAAAGACGAGTGACTGA
Protein sequenceShow/hide protein sequence
MTKKKEERFEAIDQEISGIRAELQKLPAVEEKLSSLAMVKNIEQLSIQSEKQQQQHQLLMKYIEGIVKEKFVITLDTEGSSSRTKTSENKVVEGEAMILELTEESKTSKK
KEEEKTSD