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IVF0026521 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026521
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:21839450..21840010
RNA-Seq ExpressionIVF0026521
SyntenyIVF0026521
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.02e-117100Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.98e-11797.31Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRG+HNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSDEQQQQEN EEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.29e-11595.74Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQ--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQ  SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQ--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMH HGRGRGEHNEYLYYEVPAAVP+QS+E QQQENA VP QSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.63e-11799.46Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.75e-12198.94Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQ--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQ  SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQ--SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein5.4e-96100Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein3.9e-9498.39Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSD QQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.6e-9599.46Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDS VGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.9e-9397.31Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYYDL
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDL

Query:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        GSDPSSSYMHGHGRGRG+HNEYLYYEVPAAVPEQS+ELQQQENAAVPGQSDEQQQQEN EEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  GSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-9498.94Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM--TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM  TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM--TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GGAAGAAGTGCCTCCAATGACACAAACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAAT
CGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCAT
GGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTACCTGCAGCGGTACCCGAGCAATCAAATGAGCTACAACAACAAGAGAATGCAGCAGTACC
CGGGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAGGTTGTG
GAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GGAAGAAGTGCCTCCAATGACACAAACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAAT
CGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCAT
GGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTACCTGCAGCGGTACCCGAGCAATCAAATGAGCTACAACAACAAGAGAATGCAGCAGTACC
CGGGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAGGTTGTG
GAACACATTGA
Protein sequenceShow/hide protein sequence
MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMH
GHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH