; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026523 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026523
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionExtensin_2 domain-containing protein
Genome locationchr03:25740154..25740465
RNA-Seq ExpressionIVF0026523
SyntenyIVF0026523
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KEH30231.1 extensin-like region protein [Medicago truncatula]8.75e-0751.56Show/hide
Query:  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV
        Y+ PSPPPPSPP  +++ SPPPP  ++      PPPSPP  +++ SPPPP  ++Y SPPPP  V
Subjt:  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV

KGN62573.1 hypothetical protein Csa_021860 [Cucumis sativus]4.48e-2969.52Show/hide
Query:  MNAVGFFLLFL--FSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPP
        MN VG FLLFL   S FSHS VHA      ELKQS+K+AYL  SPPPPS   AFL+LSPPPPA+ F R S  PPPS   AFLFLSPPPPSAFLYTSPPPP
Subjt:  MNAVGFFLLFL--FSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPP

Query:  AQVAE
        A V E
Subjt:  AQVAE

PNX64615.1 extensin-like protein, partial [Trifolium pratense]5.26e-0746.48Show/hide
Query:  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSS-------KLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV
        Y+ PSPPPPSPP  +++ SPPPP  ++             PPPSPP  +++ SPPPP  ++Y SPPPP  V
Subjt:  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSS-------KLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV

XP_023520927.1 extensin-like [Cucurbita pepo subsp. pepo]9.77e-1946.62Show/hide
Query:  MNAVGFFLLFLFSLFSHSFVHAARVTFPELKQSSKA--AYLLPSPPPPS-------PPAAFLFLSPPPPAKLFSRSS------------------KLPPP
        MN VGFFLLF+FSLFSH F+  A  ++ ELK S ++  A+L  SPPPP+       PPAAFLF SPPPP + F +S                   K PPP
Subjt:  MNAVGFFLLFLFSLFSHSFVHAARVTFPELKQSSKA--AYLLPSPPPPS-------PPAAFLFLSPPPPAKLFSRSS------------------KLPPP

Query:  S------------------PPAAFLFLSPPPPSAFLYTSPPPPAQVAE
        +                  PPAAFLF SPPPP+AFL+ SPPPP Q AE
Subjt:  S------------------PPAAFLFLSPPPPSAFLYTSPPPPAQVAE

XP_023909450.1 extensin-3-like [Quercus suber]3.48e-0754.39Show/hide
Query:  PPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPA
        PPPP PP++F F SPPPP+  +  S     P PP++F F SPPPPS+F + SPPPP+
Subjt:  PPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPA

TrEMBL top hitse value%identityAlignment
A0A072ULF8 Extensin-like region protein1.4e-0551.56Show/hide
Query:  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV
        Y+ PSPPPPSPP  +++ SPPPP  ++      PPPSPP  +++ SPPPP  ++Y SPPPP  V
Subjt:  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV

A0A0A0LLD7 Extensin_2 domain-containing protein6.3e-2269.52Show/hide
Query:  MNAVGFFLLF--LFSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPP
        MN VG FLLF  L S FSHS VHA      ELKQS+K+AYL  SPPPPS   AFL+LSPPPPA+ F R S  PPPS   AFLFLSPPPPSAFLYTSPPPP
Subjt:  MNAVGFFLLF--LFSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPP

Query:  AQVAE
        A V E
Subjt:  AQVAE

A0A396I8H9 Putative Extensin domain-containing protein3.2e-0547.22Show/hide
Query:  YLLPSPPPPSPPAAFLFLSPPPPAKLFS------RSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQVAE
        Y+ PSPPPPSPP  +++ SPPPP  +++      +S   P PSPP  +++ SPPPP  ++Y SPPPP  V E
Subjt:  YLLPSPPPPSPPAAFLFLSPPPPAKLFS------RSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQVAE

A0A7N2KKX8 Uncharacterized protein5.4e-0547.22Show/hide
Query:  YLLPSPPPPSPPAAFLFLSPPPPAKLFS-----RSSKLPPPSPPAAFLFLSPPPPSA-----FLYTSPPPPA
        Y  P PP PSPP  +++ SPPPP+ LF      +S   PPPSPP  +++ SPPPPS+     ++Y SPPPP+
Subjt:  YLLPSPPPPSPPAAFLFLSPPPPAKLFS-----RSSKLPPPSPPAAFLFLSPPPPSA-----FLYTSPPPPA

A0A7N2MQ52 Uncharacterized protein1.1e-0545.24Show/hide
Query:  PELKQSSKAAYLLPSPPP--PSPPAAFLFLSPPPPAKLFS-----RSSKLPPPSPPAAFLFLSPPPPSA-----FLYTSPPPPA
        P L  S    Y+  SPPP  PSPP  +++ SPPPP+ LF      +S   PPPSPP  +++ SPPPPS+     ++Y SPPPP+
Subjt:  PELKQSSKAAYLLPSPPP--PSPPAAFLFLSPPPPAKLFS-----RSSKLPPPSPPAAFLFLSPPPPSA-----FLYTSPPPPA

SwissProt top hitse value%identityAlignment
O65375 Leucine-rich repeat extensin-like protein 12.0e-0450Show/hide
Query:  PSPPPP----SPPAAFLFLSPPPPAKLFSRSSKLPPP----SPPAAFLFLSPPPPSAFLYTSPPPP
        PSPPPP    SPP  +++ SPPPP  ++  SS  PPP    SPP  +++ SPPPP  ++Y+SPPPP
Subjt:  PSPPPP----SPPAAFLFLSPPPPAKLFSRSSKLPPP----SPPAAFLFLSPPPPSAFLYTSPPPP

Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 11.4e-0550Show/hide
Query:  PSPPPP----SPPAAFLFLSPPPPAKLFSRSSKLPPP----SPPAAFLFLSPPPPSAFLYTSPPPP
        PSPPPP    SPP  +++ SPPPP  ++  SS  PPP    SPP  +++ SPPPP  ++Y+SPPPP
Subjt:  PSPPPP----SPPAAFLFLSPPPPAKLFSRSSKLPPP----SPPAAFLFLSPPPPSAFLYTSPPPP

AT1G26240.1 Proline-rich extensin-like family protein2.6e-0442.67Show/hide
Query:  YLLPSPPPP------SPPAAFLFLSPPPPAKLFSRSSKLPPP-----SPPAAFLFLSPPPPSAFLYTSPPPPAQV
        Y+  SPPPP       PP+ +++ SPPPP  ++  SS  PPP      PP  +++ SPPPP  ++Y SPPPP  V
Subjt:  YLLPSPPPP------SPPAAFLFLSPPPPAKLFSRSSKLPPP-----SPPAAFLFLSPPPPSAFLYTSPPPPAQV

AT1G26250.1 Proline-rich extensin-like family protein1.6e-0444.29Show/hide
Query:  YLLPSPPPP------SPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV
        Y+  SPPPP       PP  +++ SPPPP  ++S     PPP PP  +++ SPPPP  ++Y+SPPPP  V
Subjt:  YLLPSPPPP------SPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQV

AT2G43150.1 Proline-rich extensin-like family protein2.0e-0440.48Show/hide
Query:  PELKQSSKAAYLLPSPPPP--SPPAAFLFLSPPPPAK-----LFSRSSKLPPPSPPAAFLFLSP------PPPSAFLYTSPPPP
        P   +S    Y   SPPPP  SPP  + + SPPPP K      +  S   P  SPP  +L+ SP      PPP  ++Y SPPPP
Subjt:  PELKQSSKAAYLLPSPPPP--SPPAAFLFLSPPPPAK-----LFSRSSKLPPPSPPAAFLFLSP------PPPSAFLYTSPPPP

AT4G08370.1 Proline-rich extensin-like family protein2.6e-0441.33Show/hide
Query:  KQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPP----PSPPAAFLFLSPPPPSAFLYTSPPPPAQV
        K    + YL  SPPPP     +++ SPPPP      S   PP      PP  F++ SPPPP+ ++Y SPPPP  V
Subjt:  KQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPP----PSPPAAFLFLSPPPPSAFLYTSPPPPAQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTGTAGGGTTCTTTCTGCTTTTCCTTTTCTCCCTTTTCTCTCATTCCTTTGTCCATGCCGCCCGTGTAACATTCCCGGAGCTGAAGCAATCTTCCAAAGCTGC
GTATCTCCTACCCTCTCCGCCGCCTCCCAGTCCTCCGGCTGCATTCCTCTTCCTCTCGCCACCACCTCCTGCAAAACTCTTCTCAAGATCTTCGAAGCTTCCGCCTCCGA
GTCCTCCCGCGGCCTTCCTGTTTCTGTCTCCGCCACCTCCTTCTGCGTTCCTGTATACCTCTCCGCCGCCCCCGGCGCAGGTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTGTAGGGTTCTTTCTGCTTTTCCTTTTCTCCCTTTTCTCTCATTCCTTTGTCCATGCCGCCCGTGTAACATTCCCGGAGCTGAAGCAATCTTCCAAAGCTGC
GTATCTCCTACCCTCTCCGCCGCCTCCCAGTCCTCCGGCTGCATTCCTCTTCCTCTCGCCACCACCTCCTGCAAAACTCTTCTCAAGATCTTCGAAGCTTCCGCCTCCGA
GTCCTCCCGCGGCCTTCCTGTTTCTGTCTCCGCCACCTCCTTCTGCGTTCCTGTATACCTCTCCGCCGCCCCCGGCGCAGGTGGCGGAATGA
Protein sequenceShow/hide protein sequence
MNAVGFFLLFLFSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQVAE