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IVF0026529 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026529
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription termination factor MTERF9
Genome locationchr10:5878330..5878743
RNA-Seq ExpressionIVF0026529
SyntenyIVF0026529
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050287.1 transcription termination factor MTERF9 [Cucumis melo var. makuwa]1.68e-86100Show/hide
Query:  MIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVD
        MIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVD
Subjt:  MIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVD

Query:  KQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        KQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
Subjt:  KQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

KAE8647981.1 hypothetical protein Csa_000499 [Cucumis sativus]1.56e-6880.29Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        M+KVDRMIQVVKT+KELGIEPKA  FV+AL+VR  MS+  WKKKI+VLKSLGWSENEIFTLFKRQPMSLARSEE +R  ADFCFNT+KLDPGTVIS P  
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        F+YSVDK+LRP+YKVLE+LKLKNLLKNKKI   LVRG
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

KAE8647996.1 hypothetical protein Csa_021439 [Cucumis sativus]5.88e-5973.72Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        M+ VDRMIQ+VKT+KELG EPKA TFVHALRVRG MSD IWKKKINVLKSLGWSE EIF  FK+ P+ L  SE+KMR  ADFCFNT KLD GT+I+YP+ 
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        F  SVDK+L P YKVLEVLK+KNLLKNKKI R  V+G
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

XP_016902733.1 PREDICTED: uncharacterized protein LOC107991849 [Cucumis melo]2.33e-89100Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

XP_031741246.1 transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus]2.78e-6780.29Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        M+KVDRMIQVVKT+KELGIEPKA  FV+AL+VR  MS+  WKKKI+VLKSLGWSENEIFTLFKRQPMSLARSEE +R  ADFCFNT+KLDPGTVIS P  
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        F+YSVDK+LRP+YKVLE+LKLKNLLKNKKI   LVRG
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

TrEMBL top hitse value%identityAlignment
A0A1S3BDE1 transcription termination factor MTERF2, chloroplastic-like1.1e-4572.26Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        MQKVDR+I  VKT+KELGIEPKA TFV+A+ VR  MSD  WKKKINV+KSLGWS+ EIFT FKR P  L  SEEK+R  ADFCFNT KLDPGT+ISYP  
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        F  S DK+LRP+YKVLEVLK+KNLLKNKKI   LV G
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

A0A1S4E3D5 uncharacterized protein LOC1079918493.2e-69100Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

A0A5A7SW09 Transcription termination factor MTERF21.1e-4572.26Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        MQKVDR+I  VKT+KELGIEPKA TFV+A+ VR  MSD  WKKKINV+KSLGWS+ EIFT FKR P  L  SEEK+R  ADFCFNT KLDPGT+ISYP  
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        F  S DK+LRP+YKVLEVLK+KNLLKNKKI   LV G
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

A0A5A7U7D5 Transcription termination factor MTERF95.6e-66100Show/hide
Query:  MIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVD
        MIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVD
Subjt:  MIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVD

Query:  KQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        KQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
Subjt:  KQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

A0A5D3CXX8 Transcription termination factor MTERF21.1e-4572.26Show/hide
Query:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS
        MQKVDR+I  VKT+KELGIEPKA TFV+A+ VR  MSD  WKKKINV+KSLGWS+ EIFT FKR P  L  SEEK+R  ADFCFNT KLDPGT+ISYP  
Subjt:  MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMS

Query:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG
        F  S DK+LRP+YKVLEVLK+KNLLKNKKI   LV G
Subjt:  FVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21150.1 Mitochondrial transcription termination factor family protein3.0e-1125.6Show/hide
Query:  RMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSV
        R  +V+  +   G +PK + FVHA+      S+   ++K  + +  GWS+ +      R P  +  S+EK+ Y  ++  N + L    +++ P+    S+
Subjt:  RMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSV

Query:  DKQLRPKYKVLEVLKLKNLLKNKKI
        +K+++P+ +V+ +L  K L+K + I
Subjt:  DKQLRPKYKVLEVLKLKNLLKNKKI

AT1G61970.1 Mitochondrial transcription termination factor family protein2.1e-0924.53Show/hide
Query:  DRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKM----------------------------
        ++  + +K + E+G +P  S FV AL+V   M++   ++K+++ KSLG+   ++++ FK+ P+SL  SE+KM                            
Subjt:  DRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKM----------------------------

Query:  -------RYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNK
               +   +F    +      V+S P  F YS++K++ P+  V++ L  K L++N+
Subjt:  -------RYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNK

AT1G61970.2 Mitochondrial transcription termination factor family protein2.1e-0924.53Show/hide
Query:  DRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKM----------------------------
        ++  + +K + E+G +P  S FV AL+V   M++   ++K+++ KSLG+   ++++ FK+ P+SL  SE+KM                            
Subjt:  DRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKM----------------------------

Query:  -------RYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNK
               +   +F    +      V+S P  F YS++K++ P+  V++ L  K L++N+
Subjt:  -------RYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNK

AT1G62010.1 Mitochondrial transcription termination factor family protein1.5e-1027.45Show/hide
Query:  VKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEK-----------------------------------
        +K + E+G +P  STFVHAL +   MSD   ++KI V +S+G+S ++++ +FK+ P SL  SE+K                                   
Subjt:  VKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEK-----------------------------------

Query:  MRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNK
        ++   +F    +      V S P    YS++K+  P+  V++VL  K LL+++
Subjt:  MRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNK

AT5G64950.1 Mitochondrial transcription termination factor family protein4.7e-0927.27Show/hide
Query:  ELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKV
        +LG    +   VHA+     +S+  + +K+ +  + G+SE+EI  + +R P  +  SE+K+    +F    + L+   +   P    Y+++K++ P+ KV
Subjt:  ELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKV

Query:  LEVLKLKNLL
        L++L+ K LL
Subjt:  LEVLKLKNLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAACGCTTAAAGAATTGGGCATTGAACCAAAGGCTTCTACGTTTGTTCATGCACTTAGAGTAAGGGGTGGAATGAG
TGATCCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAATGAGATTTTTACACTATTTAAGAGACAACCAATGTCTTTAGCTCGTTCGGAGG
AGAAAATGAGGTATGCCGCAGATTTCTGTTTCAACACTGTAAAGTTGGATCCAGGAACTGTAATTTCTTACCCTATGTCCTTCGTGTATTCAGTCGACAAGCAGCTGCGG
CCAAAGTACAAAGTTCTTGAGGTTTTGAAGCTAAAAAATCTTCTCAAGAACAAAAAGATTGTTCGGCCCCTTGTACGAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAACGCTTAAAGAATTGGGCATTGAACCAAAGGCTTCTACGTTTGTTCATGCACTTAGAGTAAGGGGTGGAATGAG
TGATCCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAATGAGATTTTTACACTATTTAAGAGACAACCAATGTCTTTAGCTCGTTCGGAGG
AGAAAATGAGGTATGCCGCAGATTTCTGTTTCAACACTGTAAAGTTGGATCCAGGAACTGTAATTTCTTACCCTATGTCCTTCGTGTATTCAGTCGACAAGCAGCTGCGG
CCAAAGTACAAAGTTCTTGAGGTTTTGAAGCTAAAAAATCTTCTCAAGAACAAAAAGATTGTTCGGCCCCTTGTACGAGGGTAG
Protein sequenceShow/hide protein sequence
MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLR
PKYKVLEVLKLKNLLKNKKIVRPLVRG