CuGenDBv2

Gene ID	IVF0026532
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Genome location	chr04:9929186..9929547
RNA-Seq Expression	IVF0026532
Synteny	IVF0026532
Gene Ontology terms	GO:0006091 - generation of precursor metabolites and energy (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0031967 - organelle envelope (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841788.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis melo subsp. melo]

3.09e-46

75.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

YP_009004049.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix]

8.84e-46

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

YP_009236285.1 NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum]

8.84e-46

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

YP_009447455.1 NADH dehydrogenase subunit 3 [Cucurbita maxima]

8.84e-46

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

YP_009751658.1 NADH dehydrogenase subunit C [Hodgsonia heteroclita]

1.26e-45

74.17

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISS+IPILAFLIS +LAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU16 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.0e-34

75.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

A0A249RXR7 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.0e-34

75.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

A0A249RZ15 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.0e-34

75.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

A0A249RZI2 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.0e-34

75.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

A0A286NG05 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.0e-34

75.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

SwissProt top hits

e value

%identity

Alignment

A0A340 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

4.4e-35

70.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFW FLIISSLIPILAF IS +LAP+SK PEKL                         L+FVVFDVETVF YPWAMSFD+LGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

P52765 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

1.2e-35

72.5

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFW FLIISSLIPILAFLIS +LAP+SK PEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Q49KZ3 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

9.9e-35

70.83

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFW FLIISS+IPILAF IS +LAP+SK PEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Q4VZH0 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

6.2e-37

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Q68S01 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

2.6e-35

72.5

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFW FLIISSLIPILAF IS VLAP+SK PEKL                         L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILIVGLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

Arabidopsis top hits

e value

%identity

Alignment

AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

9.3e-04

32.69

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Query:  LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME
        ++F++ D+E  FF+PWA+  + + +  F   + F+ IL +G +Y W++GA +
Subjt:  LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

8.6e-34

66.67

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Query:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF
        MFLLYEYDIFW FL+ISS IP+LAFLIS VL+P+ K PEKL                         L+FVVFDVETVF YPWAMSFDVLGVS FIEA IF
Subjt:  MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL-------------------------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIF

Query:  VLILIVGLVYAWRKGAMEWS
        VLILI+GLVYAWRKGA+EWS
Subjt:  VLILIVGLVYAWRKGAMEWS

ATMG00990.1 NADH dehydrogenase 3

9.3e-04

32.69

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Query:  LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME
        ++F++ D+E  FF+PWA+  + + +  F   + F+ IL +G +Y W++GA +
Subjt:  LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME

Sequences

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CDS sequence

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ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTCTTATTCCTATTTTGGCATTTCTAATTTCTGAAGTTTTAGCCCCTCTTAGCAAAGA
GCCAGAGAAACTTTTGATTTTTGTTGTTTTTGATGTTGAAACAGTTTTTTTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAA
TTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCAATGGAATGGTCTTAG

mRNA sequence

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Protein sequence

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MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKLLIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

IVF0026532 (gene) of Melon (IVF77) v1 genome