; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026574 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026574
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:21491179..21492138
RNA-Seq ExpressionIVF0026574
SyntenyIVF0026574
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045532.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.42e-22193.42Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.70e-21592.16Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L GLGISK+KDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+ NDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        Q PRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.07e-20893.42Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

TYK10887.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.42e-244100Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSNLQSATVKEV
Subjt:  QIPRLYALSNLQSATVKEV

TYK28859.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.00e-21993.1Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

TrEMBL top hitse value%identityAlignment
A0A5A7TQA8 LINE-1 retrotransposable element ORF2 protein4.8e-17793.42Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein4.8e-17793.42Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein9.0e-17693.1Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

A0A5D3CFY6 LINE-1 retrotransposable element ORF2 protein2.9e-190100Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSNLQSATVKEV
Subjt:  QIPRLYALSNLQSATVKEV

A0A5D3DZM5 LINE-1 retrotransposable element ORF2 protein9.0e-17693.1Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEKASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVN
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHLINW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKE

Query:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSN+QSATVKE+
Subjt:  QIPRLYALSNLQSATVKEV

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.0e-0723.44Show/hide
Query:  LFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRS--RSFWGQTIECIHKKLNG
        LFADD+++++E+      NL   +  F K SG   N+ KS     N +     QI     F      + YLG+ L  + +   +  +   ++ I +  N 
Subjt:  LFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRS--RSFWGQTIECIHKKLNG

Query:  WKYSQIFKGGRLTLLKASLSSLPTYQLST--FKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCK--WLWRYH
        WK       GR+ ++K ++     Y+ +    K  ++ + E+EK    F+W      Q    I   I +   +  G+ +   K   +A + K  W W Y 
Subjt:  WKYSQIFKGGRLTLLKASLSSLPTYQLST--FKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCK--WLWRYH

Query:  NESNSLWKK
        N     W +
Subjt:  NESNSLWKK

P0C2F6 Putative ribonuclease H protein At1g657502.7e-2833.51Show/hide
Query:  SRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKD
        ++  +G+ +E +  +++GW+   +   GRLTL KA LSS+P + +ST     S+   +++  R FLWG + +K+  HL+ W    SPK+  GLG+   K 
Subjt:  SRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKD

Query:  TNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIK-KWKDWFESKISWIPNDGSSLSFWHSKWQNNIPL
         N+AL+ K  WR   E NSLW   +  KY      D   +    S  S W +I    +D     + WIP DG  + FW  +W +  PL
Subjt:  TNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIK-KWKDWFESKISWIPNDGSSLSFWHSKWQNNIPL

P93295 Uncharacterized mitochondrial protein AtMg003103.8e-0624.31Show/hide
Query:  SLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINW-RICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI
        +LP Y +S F+    + K++     +F W   E+K+    + W ++C S ++  GLG   L   NQALL K  +R  ++ ++L  + + ++Y  +     
Subjt:  SLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINW-RICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI

Query:  PVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW
          VG   S    W +I   ++     +     DG     W  +W
Subjt:  PVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW

Arabidopsis top hitse value%identityAlignment
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0724.31Show/hide
Query:  SLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINW-RICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI
        +LP Y +S F+    + K++     +F W   E+K+    + W ++C S ++  GLG   L   NQALL K  +R  ++ ++L  + + ++Y  +     
Subjt:  SLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINW-RICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI

Query:  PVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW
          VG   S    W +I   ++     +     DG     W  +W
Subjt:  PVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAATATATCCCACCTCCTATTTGCGGACGATGT
ACTTATCTTTGTCGAAGACAATGAAAAGTACTTAAACAATTTACAGATGGCGCTCTACCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCTTTTGAAGTCAACAATAA
ACCCCATTAACATATCTGCCGATAGAACGGATCAGATAGCTAGACTTTTCGGGTTTCAAACTAAATTCCTACCAGTCAACTACCTAGGAGTTCCGTTAGGAGGAAACCCA
AGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCACAAAAAACTAAACGGATGGAAATACTCACAAATTTTCAAAGGAGGAAGACTTACCCTTTTAAAAGCTTC
TCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCTTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACA
AACAAAATGCTCACCTGATCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGAAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGG
CTATGGAGATACCACAATGAGTCAAACTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAGTAGTAGGTAGAAATAGTAGTGC
AAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCTAACGATGGCTCCTCCCTTTCCTTTTGGCACAGCAAATGGCAAA
ACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCAAATCTACAATCAGCTACTGTAAAGGAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAATATATCCCACCTCCTATTTGCGGACGATGT
ACTTATCTTTGTCGAAGACAATGAAAAGTACTTAAACAATTTACAGATGGCGCTCTACCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCTTTTGAAGTCAACAATAA
ACCCCATTAACATATCTGCCGATAGAACGGATCAGATAGCTAGACTTTTCGGGTTTCAAACTAAATTCCTACCAGTCAACTACCTAGGAGTTCCGTTAGGAGGAAACCCA
AGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCACAAAAAACTAAACGGATGGAAATACTCACAAATTTTCAAAGGAGGAAGACTTACCCTTTTAAAAGCTTC
TCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCTTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACA
AACAAAATGCTCACCTGATCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGAAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGG
CTATGGAGATACCACAATGAGTCAAACTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAGTAGTAGGTAGAAATAGTAGTGC
AAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCTAACGATGGCTCCTCCCTTTCCTTTTGGCACAGCAAATGGCAAA
ACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCAAATCTACAATCAGCTACTGTAAAGGAAGTTTAG
Protein sequenceShow/hide protein sequence
MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNP
RSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKW
LWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSHQIPRLYALSNLQSATVKEV