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IVF0026586 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026586
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRAB6-interacting golgin
Genome locationchr12:10568216..10571437
RNA-Seq ExpressionIVF0026586
SyntenyIVF0026586
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]1.84e-10398.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGI-GSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGI-GSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]1.94e-107100Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]4.40e-9389.39Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]4.68e-8684.57Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQ Q       +   V   IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        S IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKN+EKSQLV+KLMELVNESEKLRM+KLEELS NIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]1.00e-9693.3Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSG-MISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTT KQSWEAQQ   MQRVKNSG MISSNVN  IGSP+KEDQEEEISRSALA+FRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSG-MISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin6.6e-8098.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL

A0A1S3CFV6 RAB6-interacting golgin6.4e-83100Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

A0A5D3CH78 RAB6-interacting golgin6.4e-83100Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

A0A6J1CNF1 RAB6-interacting golgin5.1e-7289.39Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

A0A6J1I589 RAB6-interacting golgin1.4e-6684.57Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV
        MTTQKQSWEAQQ Q       +   V   IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKEV
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        S IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKN+EKSQLV+KLMELVNESEKLRM+KLEELS NIDILH
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)4.2e-5062.5Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR
        M T +Q  E  Q   +QR+K+SG IS N     GSP+ +++EEE+S+SA ALF+AKE+EIER+KME++++V+ +LG AEEAT+RLAEIREELE +TDPMR
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDI
        KE+S IRK++D +N+ELKPLG +CQ+KERE+KE L+ +NEKN+EK+  VSKL+ELV ESEKLRM KLEELSK+I+I
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)1.1e-4563.31Show/hide
Query:  QKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFI
        Q QS    Q Q+  N  ++ +   +      +ED  EE++RSAL+ FRAKE+EIE+++ME+RE+++A+LGR E+ TKRL+ IREELE M DPMRKEVS +
Subjt:  QKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFI

Query:  RKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNID
        RKKID VNKELKPLG T QKKEREYKE LD FNEKNREK QL++KLMELV ESEKLRM KLEELSK+I+
Subjt:  RKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)2.1e-4975.36Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+A+LGR EE TKRLA IREELEG+ DPMRKEV+ +RKKID VNKELKPLG T QKKEREYKE L+ FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
        KNREK QL+++LMELV ESEK+RM+KLEELSKNID +H
Subjt:  KNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

AT3G52920.1 Family of unknown function (DUF662)4.0e-4571.74Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNREKSQLVSKLME---LVNESEKLRMRKLEELSKNID
        KNREK QL++KLME   LV ESEKLR++KL+ELS++ID
Subjt:  KNREKSQLVSKLME---LVNESEKLRMRKLEELSKNID

AT3G52920.2 Family of unknown function (DUF662)9.6e-4773.33Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNREKSQLVSKLMELVNESEKLRMRKLEELSKNID
        KNREK QL++KLMELV ESEKLR++KL+ELS++ID
Subjt:  KNREKSQLVSKLMELVNESEKLRMRKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGA
TCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGAC
GAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTG
AACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATC
CAAACTAATGGAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAA
mRNA sequenceShow/hide mRNA sequence
TAAAGCCATTGCGGCGGGTTAGGGTTTGGCCACCTAACAGAGAAAGAAAATCATCATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAG
GCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGC
ATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGG
CGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTC
ACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGTTGGTGAATGAAAG
CGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAAGAAGTGTTCTTCTAAGTTCTAACTTGAATTAATCACCAACAACTTTGTT
TGTATTTCCACATTTTTTTCTCCTCAACTCTCATATACATATCTTTTCTTTTTCGAAGTTTCCCATCAGAAGAAAAAAAAAAGAGAGAGGAGGGAGAAAAAAATGGAATT
AACTTTGCCAACAAATGGGAATGACGTTTGCTTGTATTAATAAGTTTGATCACAACCAC
Protein sequenceShow/hide protein sequence
MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLV
NKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH