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IVF0026589 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026589
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr08:13923381..13923773
RNA-Seq ExpressionIVF0026589
SyntenyIVF0026589
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025555.1 uncharacterized protein E6C27_scaffold253G00440 [Cucumis melo var. makuwa]6.50e-8291.54Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNND+GEKFGCANEKQCLFH EIDDHFI+DCCE KNEVQKLMDAKIL VGQ+SMQ+IEVDMIIDKETSNDTSIT+IS+NTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLV Q PPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

KAA0050802.1 Gag-pro-like protein [Cucumis melo var. makuwa]8.04e-8191.54Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILR AGYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVD+IIDK+TSNDTSITVIS+NTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLV Q PPKFELNNWEIKRTLKV KGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

KAA0056811.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.40e-8194.57Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL V QMSMQ+I+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

KAA0063108.1 uncharacterized protein E6C27_scaffold1337G00160 [Cucumis melo var. makuwa]2.27e-91100Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

TYK00168.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]2.74e-89100Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

TrEMBL top hitse value%identityAlignment
A0A5A7ULI2 Retrotrans_gag domain-containing protein2.6e-6596.15Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKV+KGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5A7V655 Uncharacterized protein1.5e-68100Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5A7VBN6 Retrotrans_gag domain-containing protein1.4e-6394.62Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNND GEK GC NEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL VGQMSMQ+IEVDMIIDKETSNDTS TVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5D3BJJ2 Gag-pro-like protein4.2e-6394.57Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL V QMSMQ+I+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

A0A5D3BM27 Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H4.3e-68100Show/hide
Query:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACACTTTTTCAAATCCTTCGTAGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATGGGGAGAAGTTTGGATGCGCCAACGAGAAGCAGTGTTTGTTCCA
CCCTGAGATAGATGACCATTTCATTAAAGATTGTTGTGAGTTCAAGAATGAGGTACAAAAGTTGATGGATGCAAAGATTCTCTGGGTAGGACAAATGAGCATGCAAAAAA
TCGAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATTACGGTTATCTCCAAGAATACTATTTCACCTAATCTATTGGTTTCTCAGTTTCCACCAAAA
TTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGGATCACAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACACTTTTTCAAATCCTTCGTAGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATGGGGAGAAGTTTGGATGCGCCAACGAGAAGCAGTGTTTGTTCCA
CCCTGAGATAGATGACCATTTCATTAAAGATTGTTGTGAGTTCAAGAATGAGGTACAAAAGTTGATGGATGCAAAGATTCTCTGGGTAGGACAAATGAGCATGCAAAAAA
TCGAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATTACGGTTATCTCCAAGAATACTATTTCACCTAATCTATTGGTTTCTCAGTTTCCACCAAAA
TTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGGATCACAAAAGTAA
Protein sequenceShow/hide protein sequence
MNTLFQILRRAGYLSPRFNNDDGEKFGCANEKQCLFHPEIDDHFIKDCCEFKNEVQKLMDAKILWVGQMSMQKIEVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPK
FELNNWEIKRTLKVSKGSQK