; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026604 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026604
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol polyprotein
Genome locationchr01:8941743..8942333
RNA-Seq ExpressionIVF0026604
SyntenyIVF0026604
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048760.1 pol polyprotein [Cucumis melo var. makuwa]7.51e-138100Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNT
        MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNT
Subjt:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNT

Query:  EEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND
        EEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND
Subjt:  EEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND

KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]3.76e-6857.33Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  ++ TKE++ +   WTE+DFIC NLI NGL DELYDYYSTM+ AK+VW+ALQKKY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE
        TEEA SKKYAV++Y+ +                                     IID L    KDFKNTLRH TKE SL +L TRLRIEE+A KHD+KEE
Subjt:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE

Query:  VNTIPMKKPTVVLKPDLKLKENKMK
        VN IP KK T VLK DLK K NKMK
Subjt:  VNTIPMKKPTVVLKPDLKLKENKMK

KAA0059670.1 putative Polyprotein [Cucumis melo var. makuwa]2.05e-7163.78Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+  LN PFRF+GAHFK WKQKM FFLTLKK    CT +K  +  ++ TKE++ S   WTE+DFIC NLI NGL DELYDYYSTM+ AKEVWD LQ KY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN
         EE  SKKY V++Y+ + +    S  +DFKNTLRH TKELSL SLITRLRIEE+A KH++KEEVN IP KKPT VLKPDLK K NKMK ++   NN
Subjt:  TEEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN

KAA0065374.1 uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa]2.18e-6556.68Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  ++  +E++ +   WTE+DFIC NLI NGL DELYDYYSTM+  KEVWDALQKKY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE
        T+EA SKKYAV++Y+ +                                     IID L    KDFKNTLRH TKE SL SLITRL+IEE+A KHD+KEE
Subjt:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE

Query:  VNTIPMKKPTVVLKPDL
        VN IP KKPT VLK DL
Subjt:  VNTIPMKKPTVVLKPDL

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]6.37e-6656Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CT +K  +  ++ TKE++ +   WTE+DFIC NLI NGL DELYDYYSTM+ AK+VW+ALQKKY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE
        TEEA SKKYAV++Y+ +                                     IID L    KDFKNTLRH TKE SL +LITRL+IEE+A K D+K+E
Subjt:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE

Query:  VNTIPMKKPTVVLKPDLKLKENKMK
        VN IP KK T VLK DLK K NKMK
Subjt:  VNTIPMKKPTVVLKPDLKLKENKMK

TrEMBL top hitse value%identityAlignment
A0A5A7U031 Pol polyprotein1.2e-106100Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNT
        MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNT
Subjt:  MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNT

Query:  EEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND
        EEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND
Subjt:  EEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND

A0A5A7UA92 Uncharacterized protein1.2e-5656.22Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  ++ TKE++ +   WTE+DFIC NLI NGL DELYDYYSTM+ AK+VW+ALQKKY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE
        TEEA SKKYAV++Y+ +                                     IID L    KDFKNTLRH TKE SL +L TRLRIEE+A KHD+KEE
Subjt:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE

Query:  VNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN
        VN IP KK T VLK DLK K NKMK      NN
Subjt:  VNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN

A0A5D3BDS3 Uncharacterized protein6.3e-5554.94Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CT +K  +  ++ TKE++ +   WTE+DFIC NLI NGL DELYDYYSTM+ AK+VW+ALQKKY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE
        TEEA SKKYAV++Y+ +                                     IID L    KDFKNTLRH TKE SL +LITRL+IEE+A K D+K+E
Subjt:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE

Query:  VNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN
        VN IP KK T VLK DLK K NKMK      NN
Subjt:  VNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein2.8e-5554.59Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+S LNRPFRFEGAHFK WKQKM FFLTLKK    CTT+K  +  ++  +E++ +   WTE+DFIC NLI NGL DELYDYYSTM+  KEVWDALQKKY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE
        T+EA SKKYAV++Y+ +                                     IID L    KDFKNTLRH TKE SL SLITRL+IEE+A KHD+KEE
Subjt:  TEEAESKKYAVNQYMSF-------------------------------------IIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEE

Query:  VNTIPMKKPTVVLKPDLKL--KENKMKVQ
        VN IP KKPT VLK DL+   K+++ ++Q
Subjt:  VNTIPMKKPTVVLKPDLKL--KENKMKVQ

A0A5D3DRT2 Putative Polyprotein3.6e-5863.78Show/hide
Query:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN
        M+  LN PFRF+GAHFK WKQKM FFLTLKK    CT +K  +  ++ TKE++ S   WTE+DFIC NLI NGL DELYDYYSTM+ AKEVWD LQ KY+
Subjt:  MTSYLNRPFRFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYN

Query:  TEEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN
         EE  SKKY V++Y+ + +    S  +DFKNTLRH TKELSL SLITRLRIEE+A KH++KEEVN IP KKPT VLKPDLK K NKMK ++   NN
Subjt:  TEEAESKKYAVNQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein5.4e-0631.03Show/hide
Query:  RFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTE---NSTKEEIGSCDA----WTESDFICNNLIPNGLIDELYDYYS-TMSPAKEVWDALQKKYNT
        RF+G  +  W  +M  FL   K     +    +I +     +   EI   DA    W   D++C   + N L D LY  YS     AKE+WD L+  Y  
Subjt:  RFEGAHFKGWKQKM-FFLTLKKAIATCTTKKTTIPTE---NSTKEEIGSCDA----WTESDFICNNLIPNGLIDELYDYYS-TMSPAKEVWDALQKKYNT

Query:  EEAESKKYAVNQYMSF
        +E++SK+  V +Y+ F
Subjt:  EEAESKKYAVNQYMSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCATATCTCAACCGACCATTCCGCTTTGAAGGAGCTCATTTCAAGGGCTGGAAACAAAAGATGTTCTTCTTAACCTTGAAGAAAGCTATCGCCACTTGCACTAC
TAAAAAAACGACAATTCCAACTGAAAATTCAACTAAGGAGGAGATCGGGAGTTGTGATGCATGGACAGAGTCAGATTTCATATGTAATAATTTAATTCCGAATGGACTTA
TTGATGAGCTTTATGATTACTACAGTACCATGTCCCCCGCGAAAGAAGTTTGGGATGCATTGCAAAAGAAGTACAACACAGAAGAGGCCGAATCCAAAAAGTATGCAGTA
AACCAATATATGAGCTTTATTATTGATATGTTATCTTCACCGCGAAAGGATTTTAAGAATACTCTAAGGCACAATACGAAGGAGTTATCACTAGCGAGTTTGATCACACG
GCTAAGGATTGAAGAGAAGGCCTGTAAGCATGACCAAAAGGAGGAGGTGAACACTATCCCCATGAAGAAGCCCACTGTTGTTTTGAAACCAGACTTGAAATTGAAAGAGA
ACAAAATGAAGGTTCAGAACCAAGGTCCCAACAACGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTCATATCTCAACCGACCATTCCGCTTTGAAGGAGCTCATTTCAAGGGCTGGAAACAAAAGATGTTCTTCTTAACCTTGAAGAAAGCTATCGCCACTTGCACTAC
TAAAAAAACGACAATTCCAACTGAAAATTCAACTAAGGAGGAGATCGGGAGTTGTGATGCATGGACAGAGTCAGATTTCATATGTAATAATTTAATTCCGAATGGACTTA
TTGATGAGCTTTATGATTACTACAGTACCATGTCCCCCGCGAAAGAAGTTTGGGATGCATTGCAAAAGAAGTACAACACAGAAGAGGCCGAATCCAAAAAGTATGCAGTA
AACCAATATATGAGCTTTATTATTGATATGTTATCTTCACCGCGAAAGGATTTTAAGAATACTCTAAGGCACAATACGAAGGAGTTATCACTAGCGAGTTTGATCACACG
GCTAAGGATTGAAGAGAAGGCCTGTAAGCATGACCAAAAGGAGGAGGTGAACACTATCCCCATGAAGAAGCCCACTGTTGTTTTGAAACCAGACTTGAAATTGAAAGAGA
ACAAAATGAAGGTTCAGAACCAAGGTCCCAACAACGACTAG
Protein sequenceShow/hide protein sequence
MTSYLNRPFRFEGAHFKGWKQKMFFLTLKKAIATCTTKKTTIPTENSTKEEIGSCDAWTESDFICNNLIPNGLIDELYDYYSTMSPAKEVWDALQKKYNTEEAESKKYAV
NQYMSFIIDMLSSPRKDFKNTLRHNTKELSLASLITRLRIEEKACKHDQKEEVNTIPMKKPTVVLKPDLKLKENKMKVQNQGPNND