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IVF0026619 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026619
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationchr05:26228715..26229474
RNA-Seq ExpressionIVF0026619
SyntenyIVF0026619
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651509.1 hypothetical protein Csa_019434 [Cucumis sativus]2.71e-7895.69Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

XP_004150849.1 E3 ubiquitin-protein ligase RNF181 [Cucumis sativus]1.45e-7895.69Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

XP_016901521.1 PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo]9.71e-84100Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]9.19e-6077.31Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAA +V  E T  L + YPIEFLFDLD VLSGADD  C CQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWL VA+CCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDS---TLIRR
        RCL+AGQPP+S   TLIRR
Subjt:  RCLVAGQPPDS---TLIRR

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]8.07e-6785.34Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT  LP+ YPIEFLFDLD VLSGADD  C CQI+ +DS VAD P VVADVCAVCL+DF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RC VAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein1.6e-5895.69Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADDL C CQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

A0A1S4DZX3 RING-H2 finger protein ATL5-like1.9e-62100Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

A0A5A7V2P4 RING-H2 finger protein ATL5-like1.9e-62100Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSTLIRR
        RCLVAGQPPDSTLIRR
Subjt:  RCLVAGQPPDSTLIRR

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like2.5e-3568.38Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQIT---PSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCC
        MAA AV+ E T  L + YP+E LFDLD VLSG DD  C C +T    SDS VAD PTVVADVCAVC +DFR DE GKQIPCGHVYHE CISSWL VADCC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQIT---PSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCC

Query:  PLCRCLVAGQPPDSTLI
        PLCR  V   PP ST I
Subjt:  PLCRCLVAGQPPDSTLI

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like3.0e-4477.31Show/hide
Query:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAA +V  E T  L + YPIEFLFDLD VLSGADD  C CQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWL VA+CCPLC
Subjt:  MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPD---STLIRR
        RCL+AGQPP+   STLIRR
Subjt:  RCLVAGQPPD---STLIRR

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING13.9e-0945.1Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
        CAVC+DDF      KQ+PC H+YH+ C+  WL + + CP+CR  +    PD
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.9e-0843.14Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
        CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +    PD
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD

Q91YL2 E3 ubiquitin-protein ligase RNF1261.9e-0845.83Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQ
        C VC +D+   E+ +Q+PC H++H+SCI  WL   D CP+CR  + GQ
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQ

Q9VHI7 E3 ubiquitin-protein ligase Iruka7.9e-1044.23Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS
        C++C DDF+ DE  +++PC H+YHE+CI  WL +   CP+CR  +A    D+
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS

Q9Y4L5 E3 ubiquitin-protein ligase RNF1152.5e-0845.28Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST
        C VC +D+  +E  +Q+PC H +H SCI  WL + D CP+CR  + G+  DST
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.6e-1045.28Show/hide
Query:  VADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        + D   V   VCA+C ++F   E GK++ C H+YH SCI SWL + + CP+CR
Subjt:  VADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

AT2G44330.1 RING/U-box superfamily protein8.1e-1046.43Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR--CLVAGQPPDSTL
        CA+C +DF   E+ +++PC H+YH  CI  WLT  + CPLCR    VA    DS L
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR--CLVAGQPPDSTL

AT3G19950.1 RING/U-box superfamily protein1.4e-0943.14Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
        CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +    PD
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD

AT3G60080.1 RING/U-box superfamily protein5.2e-0930.43Show/hide
Query:  AVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITP--SDSPVADFPTVVAD----------------VCAVCLDDFRPDEAGKQIPCGHVYHESC
        AV ++    L SPY    L  L +  SG+     S   +     S +   PT+                   +CAVC +DF   E+ +++PC H+YH  C
Subjt:  AVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITP--SDSPVADFPTVVAD----------------VCAVCLDDFRPDEAGKQIPCGHVYHESC

Query:  ISSWLTVADCCPLCR
        I  WL+  + CPLCR
Subjt:  ISSWLTVADCCPLCR

AT5G64920.1 COP1-interacting protein 82.4e-0953.49Show/hide
Query:  VCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        VCAVC D     E GK++PCGH YH  CI  WL   + CP+CR
Subjt:  VCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCTGCTGTCATGACTGAACCCACAGTAACCTTACCGTCGCCATATCCAATCGAATTTCTCTTTGACCTCGACACAGTTCTCTCCGGAGCCGACGACCTCGA
TTGCAGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACTGTTGTGGCCGATGTTTGTGCCGTTTGTTTGGACGATTTCCGGCCAGATGAAGCCGGTA
AACAAATCCCCTGCGGACACGTGTACCATGAATCTTGTATTTCCTCCTGGCTTACCGTCGCCGACTGTTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGAT
TCGACTTTGATCCGACGGTAG
mRNA sequenceShow/hide mRNA sequence
AAAATATTTGACGAAAAAAAGAAAAAAAGAGTGTATAAGAACAAAGCCTTCTCACACCAATAGAACCCCCTATCTACTCCTCCATTTCCTTACTTCCTAACCCACTGTCT
CTCTTAAATTCTCTCAATAATCTCTCCAATGGCTGCCGCTGCTGTCATGACTGAACCCACAGTAACCTTACCGTCGCCATATCCAATCGAATTTCTCTTTGACCTCGACA
CAGTTCTCTCCGGAGCCGACGACCTCGATTGCAGCTGCCAGATCACCCCTTCCGATTCTCCCGTGGCGGATTTCCCGACTGTTGTGGCCGATGTTTGTGCCGTTTGTTTG
GACGATTTCCGGCCAGATGAAGCCGGTAAACAAATCCCCTGCGGACACGTGTACCATGAATCTTGTATTTCCTCCTGGCTTACCGTCGCCGACTGTTGCCCTCTCTGTCG
GTGCCTTGTCGCTGGCCAACCGCCGGATTCGACTTTGATCCGACGGTAGAGGTTTTTTCTTTCTTTCTTTTCTTCCTTTTTTGTTGGTGAGGTTTGTTCGACAAATTACA
AGTAATTAATTGTTGTTAATTATTGTGATTGCGACTCTTCCCCAAATTTGGAATTAGCTACTAATTGAACATAACTCTGTCTCTTAATTTCTCTCTAAAGTTACTTCGCT
GAAATGAGGTTAGTCTAACCTCCACCAAACTCTCTTTTAAAATCGGACACATTTAGTTTATGGAATAAAGTTAAGAAATTATAATAATATGAATGACCAG
Protein sequenceShow/hide protein sequence
MAAAAVMTEPTVTLPSPYPIEFLFDLDTVLSGADDLDCSCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPD
STLIRR