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IVF0026622 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026622
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:19435316..19435468
RNA-Seq ExpressionIVF0026622
SyntenyIVF0026622
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040793.1 retrotransposon protein [Cucumis melo var. makuwa]9.21e-29100Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTY
        MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTY
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTY
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]5.30e-2382Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYCDD+D+VDEGDS Y TTTAS+DIHY ETTNEWSQW DEL ESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
KAA0062745.1 retrotransposon protein [Cucumis melo var. makuwa]5.47e-2282Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYCDDVDNVDEGDSTY TT A++DIHY +TTNEWSQW DEL+ESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
KAA0066806.1 retrotransposon protein [Cucumis melo var. makuwa]1.88e-2186Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYC+DVD+VDEGDSTY TTTAS+DIHY ETTNEWSQW DELVESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
TYK07212.1 retrotransposon protein [Cucumis melo var. makuwa]1.62e-2184Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYCD+VD++DEGDSTY TTTAS+DIHY ETTNEWSQW DELVESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
TrEMBL top hitse value%identityAlignment
A0A5A7TCF8 Retrotransposon protein1.3e-20100Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTY
        MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTY
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTY
A0A5A7URP2 Retrotransposon protein4.3e-1684Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYCD+VD++DEGDSTY TTTAS+DIHY ETTNEWSQW DELVESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
A0A5A7VK86 Retrotransposon protein1.5e-1686Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYC+DVD+VDEGDSTY TTTAS+DIHY ETTNEWSQW DELVESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
A0A5D3C7D1 Retrotransposon protein4.3e-1684Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYCD+VD++DEGDSTY TTTAS+DIHY ETTNEWSQW DELVESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
A0A5D3DG14 Retrotransposon protein5.6e-1682Show/hide
Query:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
        MTYCDDVDNVDEGDSTY TT A++DIHY +TTNEWSQW DEL+ESMFT W
Subjt:  MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACAACGTGGACGAGGGGGACTCCACGTACGTGACGACCACTGCTTCAAAAGACATTCACTACTTTGAGACGACAAACGAGTGGTCTCA
GTGGTGCGACGAACTAGTCGAATCGATGTTCACTTATTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACAACGTGGACGAGGGGGACTCCACGTACGTGACGACCACTGCTTCAAAAGACATTCACTACTTTGAGACGACAAACGAGTGGTCTCA
GTGGTGCGACGAACTAGTCGAATCGATGTTCACTTATTGGTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW