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IVF0026624 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026624
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPrv splice variant B
Genome locationchr09:839111..839425
RNA-Seq ExpressionIVF0026624
SyntenyIVF0026624
Gene Ontology termsNA
InterPro domainsIPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAU04758.1 MRGH10 [Cucumis melo]5.09e-1251.9Show/hide
Query:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE
        AGSSSHPS   F+ F+SFNR EED   +   F + LY+TL  WG+K+FMDD        KK    DE N+SD  VKAIE
Subjt:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE

KAA0039329.1 TMV resistance protein N-like [Cucumis melo var. makuwa]7.04e-1754.76Show/hide
Query:  LAGSSSHPSHFPFNVFISFNRHEEDKNTKVLT---FTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKNVKAIE
        +A SS+HPSH  ++ FISFNR +  +    L    FT+ LY++LC WGMKVFM DDGGG  G  KKV  D E N++DK VKAIE
Subjt:  LAGSSSHPSHFPFNVFISFNRHEEDKNTKVLT---FTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKNVKAIE

KGN52630.1 hypothetical protein Csa_008636 [Cucumis sativus]4.10e-5282.69Show/hide
Query:  MVLAGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIETYRYIWSYTYQLTLSHIT
        MVLAGSSSH SH PFNVFI FNRHEED   K  + TRDLYK LCI GMKVFMDDDGGGGGGSKKKVLMDEDNVSDK VKAIETYRY W YTYQ T S IT
Subjt:  MVLAGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIETYRYIWSYTYQLTLSHIT

Query:  PPKT
        PPKT
Subjt:  PPKT

XP_016902418.1 PREDICTED: TMV resistance protein N-like [Cucumis melo]5.16e-1251.9Show/hide
Query:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE
        AGSSSHPS   F+ F+SFNR EED   +   F + LY+TL  WG+K+FMDD        KK    DE N+SD  VKAIE
Subjt:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE

XP_038890436.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]5.15e-1255.56Show/hide
Query:  LAGSSSHP-SHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE
        +AGSSS+P S   F+VFISFNR EED+N +   F ++LY+ L  WGMKVFMDDD             DED VSDK VKAIE
Subjt:  LAGSSSHP-SHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE

TrEMBL top hitse value%identityAlignment
A0A0A0KSQ6 Uncharacterized protein3.4e-3982.69Show/hide
Query:  MVLAGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIETYRYIWSYTYQLTLSHIT
        MVLAGSSSH SH PFNVFI FNRHEED   K  + TRDLYK LCI GMKVFMDDDGGGGGGSKKKVLMDEDNVSDK VKAIETYRY W YTYQ T S IT
Subjt:  MVLAGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIETYRYIWSYTYQLTLSHIT

Query:  PPKT
        PPKT
Subjt:  PPKT

A0A1S4E2G9 TMV resistance protein N-like9.6e-1051.9Show/hide
Query:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE
        AGSSSHPS   F+ F+SFNR EED   +   F + LY+TL  WG+K+FMDD        KK    DE N+SD  VKAIE
Subjt:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE

A0A5A7TDI7 TMV resistance protein N-like2.9e-1454.76Show/hide
Query:  LAGSSSHPSHFPFNVFISFNRHEEDKNTKVL---TFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKNVKAIE
        +A SS+HPSH  ++ FISFNR +  +    L    FT+ LY++LC WGMKVFM DDGGG  G  KKV  D E N++DK VKAIE
Subjt:  LAGSSSHPSHFPFNVFISFNRHEEDKNTKVL---TFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKNVKAIE

M4QW81 Resistance gene-like protein4.8e-0949.43Show/hide
Query:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGG--------GGGSKKKVLMDEDNVSDKNVKAIE
        AGSSSHPS   F+VF+SFNR EED   +   F + LY+TL  WG+K+FMDDD               KK  + DE N+SD  VKAIE
Subjt:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGG--------GGGSKKKVLMDEDNVSDKNVKAIE

Q5DMW3 MRGH109.6e-1051.9Show/hide
Query:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE
        AGSSSHPS   F+ F+SFNR EED   +   F + LY+TL  WG+K+FMDD        KK    DE N+SD  VKAIE
Subjt:  AGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGGCTGGTTCATCATCTCATCCATCTCATTTTCCTTTTAATGTTTTCATAAGTTTCAACAGACATGAGGAAGACAAAAATACAAAAGTTTTAACTTTTACGAG
GGATTTATATAAGACTTTGTGTATTTGGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGAGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGACAATGTGA
GCGATAAGAATGTGAAAGCAATTGAAACTTACAGGTATATTTGGTCATATACATATCAACTCACCTTGTCCCATATTACACCACCAAAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGGCTGGTTCATCATCTCATCCATCTCATTTTCCTTTTAATGTTTTCATAAGTTTCAACAGACATGAGGAAGACAAAAATACAAAAGTTTTAACTTTTACGAG
GGATTTATATAAGACTTTGTGTATTTGGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGAGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGACAATGTGA
GCGATAAGAATGTGAAAGCAATTGAAACTTACAGGTATATTTGGTCATATACATATCAACTCACCTTGTCCCATATTACACCACCAAAAACTTAA
Protein sequenceShow/hide protein sequence
MVLAGSSSHPSHFPFNVFISFNRHEEDKNTKVLTFTRDLYKTLCIWGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKNVKAIETYRYIWSYTYQLTLSHITPPKT