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IVF0026630 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026630
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr11:5812462..5812674
RNA-Seq ExpressionIVF0026630
SyntenyIVF0026630
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0032259 - methylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057388.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]6.20e-2988.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        +NESDIQNSPATKSK+GKA+SS DIGETS ERKTDSDEN+NDRSKFKKVEMPVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

KAA0061441.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]8.61e-3288.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        MNESDIQNSPATKSKDGKA+SSRDIGETSTERKTDSDEN++D+SKFK+VE PVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

KAA0063463.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.67e-2988.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        +NESDIQNSPATKSK+GKA+SS DIGETS ERKTDSDEN+NDRSKFKKVEMPVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

KAA0066162.1 histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]6.37e-2986.76Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAER
        MNESDIQNSPATKSKDGKA+SS DI ETS ERK DSDEN++DRSKFKKVEMPVF GED ESWLFRAER
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAER

TYK15204.1 histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]6.37e-2986.76Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAER
        MNESDIQNSPATKSKDGKA+SS DI ETS ERK DSDEN++DRSKFKKVEMPVF GED ESWLFRAER
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAER

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ7 Ty3/gypsy retrotransposon protein4.6e-2488.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        +NESDIQNSPATKSK+GKA+SS DIGETS ERKTDSDEN+NDRSKFKKVEMPVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

A0A5A7V5U6 Ty3/gypsy retrotransposon protein4.6e-2488.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        +NESDIQNSPATKSK+GKA+SS DIGETS ERKTDSDEN+NDRSKFKKVEMPVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

A0A5D3B8Y6 Ty3/gypsy retrotransposon protein4.6e-2488.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        +NESDIQNSPATKSK+GKA+SS DIGETS ERKTDSDEN+NDRSKFKKVEMPVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

A0A5D3DDY2 Transposon Tf2-1 polyprotein isoform X14.6e-2488.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        MNESDIQNSPATKSKDGKA+SSRDIGETSTERKTDSDEN++D+SKFK+VE PVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

A0A5D3DYS4 Ty3/gypsy retrotransposon protein4.6e-2488.57Show/hide
Query:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF
        +NESDIQNSPATKSK+GKA+SS DIGETS ERKTDSDEN+NDRSKFKKVEMPVF GED ESWLFRAERYF
Subjt:  MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAATCGGATATCCAGAACTCGCCGGCGACGAAATCGAAGGATGGCAAAGCGACTTCTAGTCGCGATATCGGAGAAACCAGCACGGAAAGAAAAACCGATTCGGA
TGAAAACTCTAATGATCGAAGTAAATTCAAGAAAGTTGAGATGCCGGTATTCATTGGGGAAGATCTGGAATCGTGGTTGTTCCGAGCAGAAAGATACTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGAATCGGATATCCAGAACTCGCCGGCGACGAAATCGAAGGATGGCAAAGCGACTTCTAGTCGCGATATCGGAGAAACCAGCACGGAAAGAAAAACCGATTCGGA
TGAAAACTCTAATGATCGAAGTAAATTCAAGAAAGTTGAGATGCCGGTATTCATTGGGGAAGATCTGGAATCGTGGTTGTTCCGAGCAGAAAGATACTTTTAG
Protein sequenceShow/hide protein sequence
MNESDIQNSPATKSKDGKATSSRDIGETSTERKTDSDENSNDRSKFKKVEMPVFIGEDLESWLFRAERYF