; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026684 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026684
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionType B response regulator
Genome locationchr01:29266993..29269515
RNA-Seq ExpressionIVF0026684
SyntenyIVF0026684
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR026737 - Golgin subfamily A member 6-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046668.1 type B response regulator [Cucumis melo var. makuwa]5.54e-21290Show/hide
Query:  MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRTR---------------
        MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRTR               
Subjt:  MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRTR---------------

Query:  -------AVPRKILEYMRNCGVQNITRAIVASHLQ------------VDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEV
               AVPRKILEYMRNCGVQNITRAIVASHLQ            VDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEV
Subjt:  -------AVPRKILEYMRNCGVQNITRAIVASHLQ------------VDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEV

Query:  NMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGL
        NMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGL
Subjt:  NMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGL

Query:  SNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV
        SNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV
Subjt:  SNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV
KAE8646356.1 hypothetical protein Csa_015559 [Cucumis sativus]5.18e-1461.04Show/hide
Query:  HDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINY-FDVDEALQERTGIGPRRTRAV
        H FWL+DMPV+ R+L  EENSA VPTASI+ GE G S T ELGG S A+ G+ N  FD DE LQ R  I PRRTR +
Subjt:  HDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINY-FDVDEALQERTGIGPRRTRAV
TrEMBL top hitse value%identityAlignment
A0A0A0KB26 Uncharacterized protein1.5e-4231.27Show/hide
Query:  HDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGG-EINYFDVDEALQERTGIGPRRT----------------------RAVP
        H FWL+DMPV+ R+L  EENSA VPTASI+ GE G S T ELGG S A+ G + N FD DE LQ R  I PRRT                      RAVP
Subjt:  HDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGG-EINYFDVDEALQERTGIGPRRT----------------------RAVP

Query:  RKILEYMRNCGVQNITRAIVASHLQ---------------------------------------------------------------------------
        RKILEYM NCGVQNITRAIVASHLQ                                                                           
Subjt:  RKILEYMRNCGVQNITRAIVASHLQ---------------------------------------------------------------------------

Query:  -------------------------------------------VDKASQVPFRTISFNATNGRN--------------QEENMRNQDENMRYQD------
                                                    DKA  V  ++ISFN    RN              QEEN+RNQ+ NMRYQ+      
Subjt:  -------------------------------------------VDKASQVPFRTISFNATNGRN--------------QEENMRNQDENMRYQD------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------QGNMRYQEGNMRYQEVNMTNHQG---LQENLLNYEMTN--------
                                                              +GNMRYQEGNMRYQE NM   +G    QE  L Y+  N        
Subjt:  ------------------------------------------------------QGNMRYQEGNMRYQEVNMTNHQG---LQENLLNYEMTN--------

Query:  ----------QRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLAS--LINDGLSNHVPDN
                  QRWPLF ESL RPGLTQ N+  P +  KNEP HLQNLPNQFPGYVD NNN NVI SPN   RYADGNNN +V+AS  LINDGLS+HV +N
Subjt:  ----------QRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLAS--LINDGLSNHVPDN

Query:  DRSHYHKVLRELIAYQEYNDDDHDDIMNIK
        D  H      + + YQEYN    DDIMNIK
Subjt:  DRSHYHKVLRELIAYQEYNDDDHDDIMNIK
A0A5D3D1X5 Type B response regulator2.1e-16690Show/hide
Query:  MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRT----------------
        MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRT                
Subjt:  MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRT----------------

Query:  ------RAVPRKILEYMRNCGVQNITRAIVASHLQ------------VDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEV
              RAVPRKILEYMRNCGVQNITRAIVASHLQ            VDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEV
Subjt:  ------RAVPRKILEYMRNCGVQNITRAIVASHLQ------------VDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEV

Query:  NMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGL
        NMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGL
Subjt:  NMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQNLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGL

Query:  SNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV
        SNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV
Subjt:  SNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACCCTGATTATCAACACTACAATTCACATGATTTTTGGCTGTCGGATATGCCTGTTGACTATAGAAACTTAGTAAGTGAAGAAAACTCAGCCCCCGTCCCGAC
TGCCTCTATCAGTACCGGAGAATTGGGTGGATCGATCACCAGAGAATTGGGTGGTCCGTCCACGGCAGATGGAGGAGAAATCAATTATTTTGATGTTGATGAGGCTTTAC
AGGAAAGAACAGGAATCGGCCCTAGAAGGACACGAGCTGTTCCGAGGAAAATTTTGGAATATATGAGAAATTGTGGTGTTCAAAACATCACCAGAGCAATAGTTGCTAGT
CATCTACAGGTTGATAAAGCATCACAGGTGCCCTTCCGAACAATCTCTTTCAACGCGACCAATGGAAGAAATCAAGAAGAAAACATGAGAAATCAAGATGAAAACATGAG
ATATCAAGATCAAGGAAACATGAGATATCAAGAAGGAAACATGAGATATCAAGAAGTAAACATGACAAATCATCAAGGGTTGCAAGAAAATCTCCTTAATTATGAAATGA
CAAATCAGCGATGGCCTCTATTTGAAGAATCTCTACCAAGACCAGGTTTAACGCAACCCAATATGTTTTCTCCTCCTTATTTGTATAAAAACGAGCCTACTCATCTTCAA
AATTTACCCAATCAATTCCCTGGATATGTTGATGCCAATAACAACAACAATGTCATTGCCTCTCCTAATCAATTCGCTAGATATGCTGATGGGAATAATAATAACAATGT
TCTTGCCTCTCTTATCAATGATGGATTGAGTAATCATGTTCCAGATAATGATCGTAGTCACTATCACAAGGTTTTAAGAGAACTAATAGCTTACCAAGAATACAATGACG
ATGATCATGATGATATTATGAATATCAAACCTGAAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTACCCTGATTATCAACACTACAATTCACATGATTTTTGGCTGTCGGATATGCCTGTTGACTATAGAAACTTAGTAAGTGAAGAAAACTCAGCCCCCGTCCCGAC
TGCCTCTATCAGTACCGGAGAATTGGGTGGATCGATCACCAGAGAATTGGGTGGTCCGTCCACGGCAGATGGAGGAGAAATCAATTATTTTGATGTTGATGAGGCTTTAC
AGGAAAGAACAGGAATCGGCCCTAGAAGGACACGAGCTGTTCCGAGGAAAATTTTGGAATATATGAGAAATTGTGGTGTTCAAAACATCACCAGAGCAATAGTTGCTAGT
CATCTACAGGTTGATAAAGCATCACAGGTGCCCTTCCGAACAATCTCTTTCAACGCGACCAATGGAAGAAATCAAGAAGAAAACATGAGAAATCAAGATGAAAACATGAG
ATATCAAGATCAAGGAAACATGAGATATCAAGAAGGAAACATGAGATATCAAGAAGTAAACATGACAAATCATCAAGGGTTGCAAGAAAATCTCCTTAATTATGAAATGA
CAAATCAGCGATGGCCTCTATTTGAAGAATCTCTACCAAGACCAGGTTTAACGCAACCCAATATGTTTTCTCCTCCTTATTTGTATAAAAACGAGCCTACTCATCTTCAA
AATTTACCCAATCAATTCCCTGGATATGTTGATGCCAATAACAACAACAATGTCATTGCCTCTCCTAATCAATTCGCTAGATATGCTGATGGGAATAATAATAACAATGT
TCTTGCCTCTCTTATCAATGATGGATTGAGTAATCATGTTCCAGATAATGATCGTAGTCACTATCACAAGGTTTTAAGAGAACTAATAGCTTACCAAGAATACAATGACG
ATGATCATGATGATATTATGAATATCAAACCTGAAGTCTAA
Protein sequenceShow/hide protein sequence
MSYPDYQHYNSHDFWLSDMPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTGIGPRRTRAVPRKILEYMRNCGVQNITRAIVAS
HLQVDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQEVNMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLYKNEPTHLQ
NLPNQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGLSNHVPDNDRSHYHKVLRELIAYQEYNDDDHDDIMNIKPEV