; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0026690 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026690
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr09:5287333..5292419
RNA-Seq ExpressionIVF0026690
SyntenyIVF0026690
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]5.08e-20499.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]8.70e-218100Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0045325.1 gag/pol protein [Cucumis melo var. makuwa]2.05e-20194Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDL EAQYVLGIQIIRD KNKTLALSQATYIDK+LVRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDICY VG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IV+RYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPFTKTLTAKVFEGHLESLGL+DMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.84e-20293.56Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

Query:  SVPQDMSPLEMAKGKVLSKGNIIKPD
         +P   S            GNII  D
Subjt:  SVPQDMSPLEMAKGKVLSKGNIIKPD

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]6.79e-21398.67Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTK LTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein3.2e-16698.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7TKM4 Gag/pol protein5.3e-169100Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7TZD0 Gag/pol protein2.0e-16899.33Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7UYE8 Gag/pol protein1.2e-16893.56Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

Query:  SVPQDMSPLEMAKGKVLSKGNIIKPD
         +P   S            GNII  D
Subjt:  SVPQDMSPLEMAKGKVLSKGNIIKPD

A0A5A7V1F5 Gag/pol protein1.9e-16698.67Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        IVSRYQSNPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
        VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTK LTAKVFEGHLESLGLRDMYIR
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.0e-4435.57Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N      P    ++     S       ++    P  S +G LMY+MLCTRPD+  AV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEA
        I+SRY S    + W  +K +L+YL+ T D  L++    A +  + GY DSD+   +  RKST+G +F + +   + W + +Q  +A S+ EAEY+A  EA
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEA

Query:  AKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL
         +EA+WL+  L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ   + +  I +E+ +AD FTK L A  F    + LGL
Subjt:  AKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL

P0CV72 Secreted RxLR effector protein 1613.2e-3050.38Show/hide
Query:  MRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA
        M+ +PY SAVG++MY+M+ TRPD+  AVG++S++ S+P   HW A+K +L+YL+ T+ Y L +  A    L GY+D+D+  D +SR+STSG +F LNGG 
Subjt:  MRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL
        V WRS KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  VVWRSIKQGCIADSTMEAEYVAACEAAKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-7147.28Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK+  P T +E  +M ++PY+SAVGSLMY M+CTRPDI +AVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA
        +VSR+  NPG +HW AVK IL+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE 
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEA

Query:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL
        +WL++FL +L +         +YCD+  A+  SK    H R KHI+ +YH IRE+V    + V KI++  N AD  TK +    FE   E +G+
Subjt:  VWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.4e-3334.24Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        +KD  E  Y LGI+    R    L LSQ  YI  LL R +M  +K    P      LS     K     E      Y   VGSL Y+   TRPDI YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE
         +S++   P  +H  A+K IL+YL  T ++ + +     L L  Y+D+D+  DKD   ST+G +  L    + W S KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL
          W+   L +L +   +  P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +++   +AD  TK L+   F+     +G+
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.3e-3533.56Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        +K+  +  Y LGI+    R  + L LSQ  Y   LL R +M  +K    P      L+     K P   E      Y   VGSL Y+   TRPD+ YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE
         +S+Y   P  DHW A+K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL
          W+   L +L +   ++ P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +++   +AD  TK L+   F+     +G+
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.0e-2832.16Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        ++DLG  +Y LG++I R      + + Q  Y   LL    +   K   +P    V  S         +  D +   Y   +G LMY+ + TR DI +AV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE
         +S++   P L H  AV  IL Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ  ++ S+ EAEY A   A  E
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
         +WL +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.8e-0435.9Show/hide
Query:  MYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGA-KDLILTGYTDSDFQTDKDSRKSTSG
        MY+ + TRPD+ +AV  +S++ S        AV  +L Y++ T    L Y A  DL L  + DSD+ +  D+R+S +G
Subjt:  MYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGA-KDLILTGYTDSDFQTDKDSRKSTSG

ATMG00810.1 DNA/RNA polymerases superfamily protein3.5e-1632.02Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG
        MKDLG   Y LGIQI        L LSQ  Y +++L    M + K    P    + L+   S     +  D R     S VG+L Y+ L TRPDI YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVG

Query:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE
        IV +    P L  +  +K +L+Y++ T  + + ++    L +  + DSD+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E
Subjt:  IVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKE

Query:  AVW
          W
Subjt:  AVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGT
TCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAC
GTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGG
TTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTC
TGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACT
CTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATC
ACTCTATATTGTGATAACAGTGGGGCAGTAGCTAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGAGAGATTGTGCA
ACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTC
TACGAGATATGTACATTAGGAGTGTTCCTCAGGATATGTCACCTTTGGAGATGGCTAAAGGAAAAGTTCTAAGTAAGGGCAACATTATCAAACCTGACTTACCCAAGCTT
CAGGATGTTAGACTAGTCAAAGGTCTTTCAACTAATTTGATCAGTATTGGTCAATTATGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGT
TCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAC
GTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGG
TTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTC
TGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACT
CTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATC
ACTCTATATTGTGATAACAGTGGGGCAGTAGCTAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGAGAGATTGTGCA
ACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTC
TACGAGATATGTACATTAGGAGTGTTCCTCAGGATATGTCACCTTTGGAGATGGCTAAAGGAAAAGTTCTAAGTAAGGGCAACATTATCAAACCTGACTTACCCAAGCTT
CAGGATGTTAGACTAGTCAAAGGTCTTTCAACTAATTTGATCAGTATTGGTCAATTATGTGATTAG
Protein sequenceShow/hide protein sequence
MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPG
LDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPI
TLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIRSVPQDMSPLEMAKGKVLSKGNIIKPDLPKL
QDVRLVKGLSTNLISIGQLCD