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IVF0026697 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026697
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr12:4011788..4012111
RNA-Seq ExpressionIVF0026697
SyntenyIVF0026697
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048414.1 uncharacterized protein E6C27_scaffold264G001400 [Cucumis melo var. makuwa]8.40e-6085.98Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQ QSDLMS DLNRPFRFEGAHFKRWKQKMLFFLTLKKV TACTTEK K+ + +PTEEQ+K LATWTETDFICKNLI NGLTNELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

KAA0050358.1 uncharacterized protein E6C27_scaffold88G00900 [Cucumis melo var. makuwa]1.90e-5582.24Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQFQS LMSFDLN PFRFEGAHFKRWKQKMLFFLTLKKV T CTTEK K+ + +PTEEQ+K LATWTETDFI KNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDA QKK
Subjt:  WDALQKK

KAA0055814.1 hypothetical protein E6C27_scaffold181G002040 [Cucumis melo var. makuwa]1.54e-5781.31Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M  + QSDLMS D NRPFRFEGA+FKRWKQKMLFFLTLKKVTTACTTEK K+ + +PTEEQ+K L TWTETDFICKNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]6.91e-6285.05Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQ QSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKV TACTTEKP++ + +PTE+Q+K LATWTETDFICKNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]2.54e-5984.11Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQ QSDLMS DLNR FRFEGAHFKRWKQK+LFFLTLKKV TACTTEKPK+ + +PTEEQ+K LATWTETDFICKNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

TrEMBL top hitse value%identityAlignment
A0A5A7USR3 Uncharacterized protein7.7e-4785.05Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQ QSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKV TACTTEKP++ + +PTE+Q+K LATWTETDFICKNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

A0A5A7UYY4 Uncharacterized protein1.5e-4584.11Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQ QSDLMS DLNR FRFEGAHFKRWKQK+LFFLTLKKV TACTTEKPK+ + +PTEEQ+K LATWTETDFICKNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

A0A5D3BEH3 Uncharacterized protein1.7e-4685.98Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQ QSDLMS DLNRPFRFEGAHFKRWKQKMLFFLTLKKV TACTTEK K+ + +PTEEQ+K LATWTETDFICKNLI NGLTNELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein2.5e-4585.05Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        MVGQ QSDLMS DLNRPFRFEGAHFKRWKQKMLFFLTLKKV TACTTEK K+ + +P EEQ+K LATWTETDFICKNLI NGLT+ELYDYYSTM T KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WDALQKK
Subjt:  WDALQKK

A0A5D3DRT2 Putative Polyprotein2.8e-4481.31Show/hide
Query:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV
        M GQFQSDLMSF+LN PFRF+GAHFKRWKQKMLFFLTLKKV TACT EKPK+ + +PT+EQ+  LATWTETDFICKNLI NGLT+ELYDYYSTMAT KEV
Subjt:  MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEV

Query:  WDALQKK
        WD LQ K
Subjt:  WDALQKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGACAATTTCAATCTGATTTAATGTCTTTCGATCTTAACCGACCGTTCCGATTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAAATGTTATTTTTTCTCAC
GTTGAAGAAGGTGACCACCGCTTGTACTACTGAAAAGCCGAAAATCCCAAAAATAAATCCCACAGAAGAACAAATGAAGGAGCTCGCAACCTGGACAGAAACTGATTTCA
TTTGTAAGAACTTAATTTTTAATGGACTTACTAATGAATTATATGACTATTACAGTACCATGGCCACTGTAAAAGAAGTATGGGACGCACTGCAAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGACAATTTCAATCTGATTTAATGTCTTTCGATCTTAACCGACCGTTCCGATTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAAATGTTATTTTTTCTCAC
GTTGAAGAAGGTGACCACCGCTTGTACTACTGAAAAGCCGAAAATCCCAAAAATAAATCCCACAGAAGAACAAATGAAGGAGCTCGCAACCTGGACAGAAACTGATTTCA
TTTGTAAGAACTTAATTTTTAATGGACTTACTAATGAATTATATGACTATTACAGTACCATGGCCACTGTAAAAGAAGTATGGGACGCACTGCAAAAGAAGTAA
Protein sequenceShow/hide protein sequence
MVGQFQSDLMSFDLNRPFRFEGAHFKRWKQKMLFFLTLKKVTTACTTEKPKIPKINPTEEQMKELATWTETDFICKNLIFNGLTNELYDYYSTMATVKEVWDALQKK