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IVF0026713 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026713
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr06:6837683..6838468
RNA-Seq ExpressionIVF0026713
SyntenyIVF0026713
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149790.1 probable calcium-binding protein CML28 [Cucumis sativus]7.35e-4896.39Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MADSGVNSAD ERIFKRFDANGDGKISATELGDALN FGVSSEDAKRMMDAIDKDGDGYISFQEF DFAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

XP_016902062.1 PREDICTED: polcalcin Bra n 2-like [Cucumis melo]1.60e-51100Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

XP_022143412.1 polcalcin Bra n 2-like [Momordica charantia]2.36e-4285.71Show/hide
Query:  MADS-GVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MADS GV++ +CER+FKRFDANGDGKISATELGDAL GFGVS+EDAK MMDAIDKDGDG+IS  EFSDFAKDNRALMKDFAKAF
Subjt:  MADS-GVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

XP_022948513.1 probable calcium-binding protein CML28 [Cucurbita moschata]4.99e-4690.36Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+GV+SA+CERIFKRFDANGDG+ISATELGDALNG GVSSEDAKRMMDAIDKDGDG+ISFQEF +FAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

XP_038874793.1 probable calcium-binding protein CML28 [Benincasa hispida]2.47e-4690.36Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MA+SGV++ADCERIFKRFDANGDGKISATELGDALNGFGVS+EDAKRMMDAIDKDGDG ISF+EF++FAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

TrEMBL top hitse value%identityAlignment
A0A0A0L775 Putative calcium-binding protein CML282.4e-3596.39Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MADSGVNSAD ERIFKRFDANGDGKISATELGDALN FGVSSEDAKRMMDAIDKDGDGYISFQEF DFAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

A0A1S4E1G1 polcalcin Bra n 2-like3.9e-38100Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

A0A6J1CQR0 polcalcin Bra n 2-like3.5e-3185.71Show/hide
Query:  MAD-SGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD SGV++ +CER+FKRFDANGDGKISATELGDAL GFGVS+EDAK MMDAIDKDGDG+IS  EFSDFAKDNRALMKDFAKAF
Subjt:  MAD-SGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

A0A6J1G9I0 probable calcium-binding protein CML285.8e-3490.36Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+GV+SA+CERIFKRFDANGDG+ISATELGDALNG GVSSEDAKRMMDAIDKDGDG+ISFQEF +FAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

A0A6J1KB11 probable calcium-binding protein CML285.8e-3490.36Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+GV+SA+CERIFKRFDANGDG+ISATELGDALNG GVSSEDAKRMMDAIDKDGDG+ISFQEF +FAKDNRALMKDFAKAF
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

SwissProt top hitse value%identityAlignment
P69198 Polcalcin Bra n 22.2e-2267.86Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGYIS+QEFSDFA  NR LMKD AK F
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

P69199 Polcalcin Bra r 22.2e-2267.86Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGYIS+QEFSDFA  NR LMKD AK F
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

Q39419 Polcalcin Bet v 47.9e-2060.98Show/hide
Query:  DSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        D   + A+ ERIFKRFDANGDGKISA ELG+AL   G ++ ++ K MM  ID DGDG+ISFQEF+DF + NR L+KD AK F
Subjt:  DSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

Q84V36 Polcalcin Che a 37.9e-2060.98Show/hide
Query:  DSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        D+  + AD ERIFKRFD NGDGKIS++ELGDAL   G V+ ++ +RMM  ID DGDG+ISF EF+DFA+ NR L+KD +K F
Subjt:  DSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

Q9SRP7 Probable calcium-binding protein CML286.4e-2267.86Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGYIS+QEF DFA  NR LMKD AK F
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family1.3e-0939.24Show/hide
Query:  DCERIFKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQEFSDF---AKDNRALMKDFAKAF
        + E +FK+FD NGDGKIS+ ELG  +   G  V  E+ ++ +  ID+ GDGYI+F+EF +      D   ++++   AF
Subjt:  DCERIFKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQEFSDF---AKDNRALMKDFAKAF

AT1G73630.1 EF hand calcium-binding protein family2.9e-0938.57Show/hide
Query:  DCERIFKRFDANGDGKISATELGDALNGFGVS--SEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMK
        + +++F +FDANGDGKIS +ELG+     G S   E+  R++D ID D DG+I+ +EF+   + + + ++
Subjt:  DCERIFKRFDANGDGKISATELGDALNGFGVS--SEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMK

AT3G03430.1 Calcium-binding EF-hand family protein4.6e-2367.86Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGYIS+QEF DFA  NR LMKD AK F
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF

AT3G07490.1 ARF-GAP domain 118.4e-0937.35Show/hide
Query:  VNSADCERIFKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQEFSDFAK---DNRALMKDFAKAF
        ++ A+  RIF+ FD NGDGKI+  EL D+L   G  +  +D  +M++ ID +GDGY+  +EF    +   + R   +D  +AF
Subjt:  VNSADCERIFKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQEFSDFAK---DNRALMKDFAKAF

AT5G17480.1 pollen calcium-binding protein 11.6e-2063.1Show/hide
Query:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF
        MAD+    A+ +RIFK+FDANGDGKISA EL +AL   G V+++D KRMM  ID DGDG IS+QEF+DFA  NR LMKD AK F
Subjt:  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATAGTGGCGTAAACTCAGCCGATTGCGAGAGAATTTTCAAACGATTCGATGCCAATGGCGACGGCAAGATCTCGGCAACAGAGCTGGGCGATGCTTTGAACGG
GTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGCGATGGCTATATTTCCTTCCAAGAATTCTCCGATTTCGCTAAGGATAATCGCG
CTTTGATGAAGGATTTCGCCAAGGCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
AACACATCGGCATTAGCTTCGCAAAATCACAAATATGATATGCCCCCACTTCAGCAAAAATCAGTTCTATGAACAAGGAGACAACACCAGCTGTTTCCATTCCCAATAAT
TTTGGGCAAAACAACGATTATTAAAGGAGAAGGGTAAAGAAAAAAATGAAGAAGGGAAGAAAGAAAGAGAAATAAAAAAAAAAGAAGAAGAAGAAGAAGAAGTGATTGCC
CTAAGTTCCAGATCAATTATCCCTATCAGAATTAGCTGCACAAAAATGGCAGATAGTGGCGTAAACTCAGCCGATTGCGAGAGAATTTTCAAACGATTCGATGCCAATGG
CGACGGCAAGATCTCGGCAACAGAGCTGGGCGATGCTTTGAACGGGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGCGATGGCT
ATATTTCCTTCCAAGAATTCTCCGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAGATTTTGTTGTTTTTGTTTTGGTTTTTTTTTTTT
GTTTTGTTTTGTTTTAATGGAAGATCTGATTATATGAATATTGTTACAATGAAGAAGAAGATGCTTCTTCTTCCTTTTATTTTTGTTTTGTACCACACACACATAAACAT
AACATATACTATGCTTCTCTTCGATGATGAACGTCATAAATGTTATATTTTTGATTAAGTTCCATTTTCGTTCATAAACTTTATCATTTATAATTTGTGTCATAGTCTCA
AATTATTTGTTTTGGC
Protein sequenceShow/hide protein sequence
MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF