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IVF0026729 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026729
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L15
Genome locationchr03:23349064..23349378
RNA-Seq ExpressionIVF0026729
SyntenyIVF0026729
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006412 - translation (biological process)
GO:1901135 - carbohydrate derivative metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016853 - isomerase activity (molecular function)
GO:0097367 - carbohydrate derivative binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025306.1 hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa]3.62e-2662.89Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        GWR+KK                  LEA+EG+VGG             GRRRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

KAA0034559.1 50S ribosomal protein L15 [Cucumis melo var. makuwa]8.59e-67100Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLF
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLF
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLF

Query:  LKQG
        LKQG
Subjt:  LKQG

KAA0038031.1 putative arabinose 5-phosphate isomerase [Cucumis melo var. makuwa]7.08e-38100Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN

KAA0063229.1 lon protease 2-like [Cucumis melo var. makuwa]1.12e-2361.11Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASC---------GRRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFA
        GWRRKK                  LEAEEGVVGG  RRRWRR K            GRRRRA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASC---------GRRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFA

Query:  PGLFLKQG
           FLKQG
Subjt:  PGLFLKQG

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]1.16e-1363.77Show/hide
Query:  MKDYIPDG----WRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL
        +KD  P G    WRRKKLWLETEDDD        WLEAEEGVVGGERRRRW+R KAS      AEEGV+
Subjt:  MKDYIPDG----WRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL

TrEMBL top hitse value%identityAlignment
A0A5A7SHI4 Uncharacterized protein1.3e-1962.89Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        GWR+KK                  LEA+EG+VGG             GRRRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

A0A5A7T8R2 Putative arabinose 5-phosphate isomerase9.9e-31100Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLEN

A0A5D3C8N2 40S ribosomal protein S15-43.9e-1163.77Show/hide
Query:  MKDYIPD----GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL
        +KD  P     GWRRKKL        WLETEDDDWLEAEEGVVGGERRRRW+R KAS      AEEGV+
Subjt:  MKDYIPD----GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVL

A0A5D3CCS9 50S ribosomal protein L157.0e-53100Show/hide
Query:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLF
        MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLF
Subjt:  MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLF

Query:  LKQG
        LKQG
Subjt:  LKQG

A0A5D3CTI7 Lon protease 2-like5.1e-1961.11Show/hide
Query:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNK---------ASCGRRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFA
        GWRRKK                  LEAEEGVVGG  RRRWRR K            GRRRRA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA
Subjt:  GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNK---------ASCGRRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFA

Query:  PGLFLKQG
           FLKQG
Subjt:  PGLFLKQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGACTACATACCAGATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGG
CGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGA
GAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGGAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGACTACATACCAGATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGG
CGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGA
GAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGGAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA
Protein sequenceShow/hide protein sequence
MKDYIPDGWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG