CuGenDBv2

Gene ID	IVF0026749
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription initiation factor IIF subunit alpha
Genome location	chr04:11207549..11213506
RNA-Seq Expression	IVF0026749
Synteny	IVF0026749
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0005674 - transcription factor TFIIF complex (cellular component) GO:0001096 - TFIIF-class transcription factor complex binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	IPR008851 - Transcription initiation factor IIF, alpha subunit IPR011039 - Transcription Factor IIF, Rap30/Rap74, interaction IPR036388 - Winged helix-like DNA-binding domain superfamily IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]

0.0

98.7

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Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

XP_016900419.1 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo]

0.0

99.81

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Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]

0.0

94.06

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Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED-DEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE+ D+DDDD +E++GGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED-DEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

XP_031738317.1 transcription initiation factor IIF subunit alpha isoform X2 [Cucumis sativus]

0.0

98.84

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Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILR
        RLRTPEDKNAFAEILR
Subjt:  RLRTPEDKNAFAEILR

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]

0.0

97.21

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDL+LKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKE VGTSGRGRRK TGDENEGNVSDRGEEDEEEEA RKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDE V TSKSTASKGAPA VKTEP+SHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA6 Transcription initiation factor IIF subunit alpha

1.3e-291

98.7

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha

3.3e-295

99.81

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha

1.9e-271

92.39

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK  GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRK-NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+ K TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSAKGTPSTAKTAKGKRK-NGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha

5.8e-276

94.06

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+D+DDDD +E++GGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha

3.5e-273

92.99

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE
        GPAAFGEVEKFDDK+++G +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIE  GDDWEHEEIFTDDDE
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE

Query:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSP
        TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDG   EDD+DDDD +E++GGTPV PSKQKD VKEEAAANSP
Subjt:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSP

Query:  SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
        SKP PSGSAKGT STAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEG+ TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVA
Subjt:  SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA

Query:  KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
        KFKARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

SwissProt top hits

e value

%identity

Alignment

Q54WV4 General transcription factor IIF subunit 1

4.2e-13

27.17

Show/hide

Query:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K      +  G  E  
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF

Query:  DDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL
          K          R    D N    ++  ++ ++  A R+ R     +G G+D D         D DDD    GD        T +DE    + EE ED+
Subjt:  DDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL

Query:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDED-------TGGTPVLPSKQKDTVKEEAAANSPSKPTPSGS
                E+K+  + + ++N+ E  L+    + K     TGG +D D  DDEDD+D D+D         G          +VK+E      SK +    
Subjt:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDED-------TGGTPVLPSKQKDTVKEEAAANSPSKPTPSGS

Query:  AKGTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSS----HSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         K   S+ K+ + K +KN  D    +   KK+K E          P+S       +P+  + +       +  P TEE I+ VL++   V + DL+  FK
Subjt:  AKGTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSS----HSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKING
          L+ P++K  F  ++  ++R+ + NG
Subjt:  ARLRTPEDKNAFAEILRRISRIQKING

Q9SU25 Transcription initiation factor IIF subunit alpha

3.3e-183

67.27

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYNVRA+A +DKNYFIGRF++GLPNF  K+ +ENKWSL K+  
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQ TDA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD
        GPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTD
Subjt:  GPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD

Query:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANS
        DDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD +DD+D DD +E   GT V  SKQK+  KEE   N+
Subjt:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQ
        P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL +
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQ

Query:  RTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRK
        +  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  RTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRK

Arabidopsis top hits

e value

%identity

Alignment

AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

4.9e-118

65.19

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE

Query:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE
        SGKELKKLL +  GL++SD +DD+D DD +E   GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE

Query:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSY
         +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

4.9e-118

65.19

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE

Query:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE
        SGKELKKLL +  GL++SD +DD+D DD +E   GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE

Query:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSY
         +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGTTCGATTTGCTCCTGAAGCCATCGTGCAGTGGATGTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGTTTGACCTGTGGCAAAAC
TATGGCGGAGAACAAGGGCAAATGCTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTG
GTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGG
GAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCA
GGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAA
AGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGT
GGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAG
TAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCACGAAGAGATTT
TTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGATGAAGAAGATGAGGATGAA
GAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGA
CGATGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGAT
CTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAA
TTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTACGGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGA
AGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGACAAAAATGCTTTTGCTGAAA
TACTACGGAGAATTTCAAGGATTCAAAAGATAAATGGAGGTCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG

mRNA sequence

Show/hide mRNA sequence

GATCTATACAAAATTTTCTTCCATTTTGTCTTCGATTCCTCTTTCATTAGAACACTCGTTTGATTGATTAGAATTCATTCCAATCCCCAAATAACTCCAAGCATCATCTC
GAAGTTAAAAATAAATCAAATTGACGGTTAAATTCAAACTTTGGTTACCAAAAGTTACAAATACTAAAAAAAAGGAAAATAAGAGAAAAAATAAAAAGAAAAAGAAAGAG
AAAATAAAGCAAGGCAGCCCTAGAGATCGGCCCTTCGCGCTCTCTCCCCTTGATCTCAGCTTTTCTCACCTCCACGTCGCCACCACCTTCTCCGCCCTATCGCTTAGCCG
CCTCTGTCGTGCTCCGCCCTCTTTACGCCTGCCGTCACCACCAGCAGAGGTAAAATCTCTCTCTCCCTTTTCGGTTTCTCTCTCTCTCTCTCTCACTCTCACCCCTGCTC
CACCGCGGTCCATCGCTCGACCTCTATCGTTCTCGACAACTTCACCCACTGCCGGATCTGTGACGACGACACGTGATTAGACAGCAAACATCTACTTGTTCATCGCTTTT
AACGGCTCTTGCGAACGAAAAGCCTTGCAAATAGTTTCGAATTAGATGGTCTCACTTGTTAGGGTTTAGCACAATATATGTGGAGGGTCGTTGTTGCTTAGTGACTGCCT
TAGCAACCAAACGTAGGAGAATCAGTTGTCTGGTATTGTAGATTTTTGTGGCTGAATTAAGGGGTGTGAGATGTCGTTCGATTTGCTCCTGAAGCCATCGTGCAGTGGAT
GTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGTTTGACCTGTGGCAAAACTATGGCGGAGAACAAGGGCAAATGCTATGATTGTGGGGCT
ACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTGGTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAG
AAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAA
CAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCAGGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTAC
AACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGC
TGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGTGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAG
GCAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAGTAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCT
AGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGA
AAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGATGAAGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAG
AGTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGACGATGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCT
TCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGG
GAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTA
CGGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACT
ACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGACAAAAATGCTTTTGCTGAAATACTACGGAGAATTTCAAGGATTCAAAAGATAAATGGAGG
TCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAGAAGAATCAAGTTGATGTTTCATCTTTGTGATGTAGCTGATTCATGATTCCTTACTGGTTGGTGTGTTATGGTC
GTTAAGTACAATGTTTATGTGTCGAAACTCTATGCTGCAATAGCTTGAGAGGGCCTCCTCTTTCACATGTGATGTGATGAACTTGATATGGTACACTTTTATCTAGGCAA
ATGCAAAGGATAAATTTGTGGATTTGATAGAGGCATTCACTATTGGAATTTAAGTTCAACAAGATATAGGTATACGTTGAGAAAGAAACGAAAGTTTCTTCAGACATTTT
GTCATATTGGTTGTCATATCAATTTTGGCATTTTCTCAGAGTCGTTTCTAAAAGAATGCTTGGAGTAAAATAATGTTAAAATAAATAGGGTATTCTTGGTTTCGTTGAAG
TGTTTGGTGA

Protein sequence

Show/hide protein sequence

MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALR
EKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS
GRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEEDEDE
ENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE
LKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

IVF0026749 (gene) of Melon (IVF77) v1 genome