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IVF0026774 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026774
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:3068256..3068501
RNA-Seq ExpressionIVF0026774
SyntenyIVF0026774
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033940.1 retrotransposon protein [Cucumis melo var. makuwa]4.23e-43100Show/hide
Query:  LRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
        LRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
Subjt:  LRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA

KAA0055439.1 retrotransposon protein [Cucumis melo var. makuwa]2.27e-1852.63Show/hide
Query:  DDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDD
        ++QL  I EWP L  Q+ S TRQEV+RQL  I EL ++D+ + +R L  N+ DMKAFLD+P+ MK  YC+IILQ++
Subjt:  DDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDD

KAA0056139.1 retrotransposon protein [Cucumis melo var. makuwa]8.58e-2053.09Show/hide
Query:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
        MKCA+DQLR I EW  +A+QNE+   QEV+ QLHAI EL+ LD+ +  R L  NL DM+ FL+I E+ KMD+C ++L++D+
Subjt:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA

KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]1.34e-3274.07Show/hide
Query:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
        ++CA+DQLR I EWPKLAMQ+E ATR EVIRQL  I EL+ LD+A C+RKL QNLADMKAFL +PEEMKMDYC +ILQDDA
Subjt:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA

TYK14144.1 retrotransposon protein [Cucumis melo var. makuwa]6.78e-2157.14Show/hide
Query:  CADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQD
        CA+DQLRAI EWP +A+QNE+  RQEV+ QLHAI EL+ LD  +C R L  NL DM+ FL+I E+ KMD+C ++L++
Subjt:  CADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQD

TrEMBL top hitse value%identityAlignment
A0A5A7SSK8 Retrotransposon protein4.8e-33100Show/hide
Query:  LRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
        LRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
Subjt:  LRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA

A0A5A7UFK2 Retrotransposon protein2.9e-1453.95Show/hide
Query:  DDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDD
        ++QL  I EWP L  Q+ S TRQEV+RQL AI EL ++D+   +R L +N+ DMKAFLD+P+ MK  YC+IILQ++
Subjt:  DDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDD

A0A5A7URM1 Retrotransposon protein5.9e-1553.09Show/hide
Query:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
        MKCA+DQLR I EW  +A+QNE+   QEV+ QLHAI EL+ LD+ +  R L  NL DM+ FL+I E+ KMD+C ++L++D+
Subjt:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA

A0A5A7UUF7 Retrotransposon protein1.1e-2474.07Show/hide
Query:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA
        ++CA+DQLR I EWPKLAMQ+E ATR EVIRQL  I EL+ LD+A C+RKL QNLADMKAFL +PEEMKMDYC +ILQDDA
Subjt:  MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA

A0A5D3CSY3 Retrotransposon protein7.0e-1657.14Show/hide
Query:  CADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQD
        CA+DQLRAI EWP +A+QNE+  RQEV+ QLHAI EL+ LD  +C R L  NL DM+ FL+I E+ KMD+C ++L++
Subjt:  CADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGTGCGGATGACCAGCTGAGGGCCATTGAGGAGTGGCCAAAGTTAGCTATGCAAAATGAAAGCGCAACTCGGCAGGAAGTCATTAGACAGTTGCATGCTATCTT
TGAGCTGAATATATTGGACAAGGCATATTGCGTGCGGAAGCTGACACAAAACTTGGCCGACATGAAAGCATTCTTGGACATACCCGAGGAGATGAAGATGGACTACTGTG
CGATCATTCTACAAGATGATGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGTGCGGATGACCAGCTGAGGGCCATTGAGGAGTGGCCAAAGTTAGCTATGCAAAATGAAAGCGCAACTCGGCAGGAAGTCATTAGACAGTTGCATGCTATCTT
TGAGCTGAATATATTGGACAAGGCATATTGCGTGCGGAAGCTGACACAAAACTTGGCCGACATGAAAGCATTCTTGGACATACCCGAGGAGATGAAGATGGACTACTGTG
CGATCATTCTACAAGATGATGCGTGA
Protein sequenceShow/hide protein sequence
MKCADDQLRAIEEWPKLAMQNESATRQEVIRQLHAIFELNILDKAYCVRKLTQNLADMKAFLDIPEEMKMDYCAIILQDDA