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IVF0026781 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026781
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA-directed RNA polymerase II subunit RPB2
Genome locationchr04:316181..316446
RNA-Seq ExpressionIVF0026781
SyntenyIVF0026781
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60447.1 hypothetical protein Csa_002577 [Cucumis sativus]4.72e-3193.33Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQT+ATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG+SK DSSSETP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
XP_004148372.3 uncharacterized protein LOC101212897 [Cucumis sativus]3.44e-3193.33Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQT+ATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG+SK DSSSETP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
XP_016903560.1 PREDICTED: uncharacterized protein LOC103503490 [Cucumis melo]2.69e-33100Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
XP_023553989.1 uncharacterized protein LOC111811404 [Cucurbita pepo subsp. pepo]7.02e-2993.22Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S SDSSS TPQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
XP_038888236.1 uncharacterized protein LOC120078095 [Benincasa hispida]5.28e-2788.71Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSS---ETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLI DLRRG S SDSSS   ETPQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSS---ETPQ
TrEMBL top hitse value%identityAlignment
A0A0A0LIB2 Uncharacterized protein2.8e-2293.33Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQT+ATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG+SK DSSSETP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
A0A1S4E6G4 uncharacterized protein LOC1035034901.1e-23100Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
A0A5A7TAA3 Putative membrane lipoprotein1.1e-23100Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
A0A6J1F0E3 uncharacterized protein LOC1114380563.2e-1889.83Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S +DSSS  PQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
A0A6J1I859 uncharacterized protein LOC1114718138.5e-1991.53Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S +DSSS TPQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17085.1 Putative membrane lipoprotein3.0e-1670Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        M KSF+LIQT+A +G FSA+S WYGFMFGRESARK+LG LI++LRRG S SDS   TP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATCCTTCACTCTGATTCAGACAATTGCGACTGCCGGAGCCTTCTCTGCGATTTCATTCTGGTATGGTTTCATGTTTGGAAGAGAGTCCGCTCGTAAAGACTT
GGGAGATTTGATTCAAGATCTACGCCGAGGAGTCTCTAAATCCGATTCTTCTTCTGAAACTCCTCAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAATCCTTCACTCTGATTCAGACAATTGCGACTGCCGGAGCCTTCTCTGCGATTTCATTCTGGTATGGTTTCATGTTTGGAAGAGAGTCCGCTCGTAAAGACTT
GGGAGATTTGATTCAAGATCTACGCCGAGGAGTCTCTAAATCCGATTCTTCTTCTGAAACTCCTCAGTCTTGA
Protein sequenceShow/hide protein sequence
MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS